Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313697

Identifier: 158313697

GI number: 158313697

Start: 2237650

End: 2238039

Strand: Direct

Name: 158313697

Synonym: Franean1_1861

Alternate gene names: NA

Gene position: 2237650-2238039 (Clockwise)

Preceding gene: 158313694

Following gene: 158313698

Centisome position: 24.91

GC content: 73.33

Gene sequence:

>390_bases
ATGACGGTGCGGACGGGGCGCGACGAACGGGTCGTCGACCTCACCGAGCCGGCGGCCGAGTTCGTCGCCGGCCGGGGCGA
CGGGCTGCTGTCCGTCTTCATCCCGCACGCGACGGCGGGCGTGGCCATCCTCGAGCTGGGCGCCGGCAGCGACGACGACC
TCCTCGCCGCCCTGGCCGCCCTGCTGCCCGCCGACGACCGCTGGCGGCACGCCCACGGCTCGCCCGGGCATGGCCGCTCA
CACGTGATGCCAGCCATCATCCCGCCGTCCCTGACCGTTCCCGTCCTGGACGGGCGGCTCGCGCTCGGTACCTGGCAGTC
GGTGGCGCTTGTCGACCTCAATGTGGACAACCCTGAGCGAACCGTCCGGTTCTCCTTCCTGCCGGGCTGA

Upstream 100 bases:

>100_bases
TGCGGGCGGTCGCACCGGCAGGTGCGGGATGGTTGGGGATACGTGCGCCCGAGTTGTGGACGCCCGCCGAGGGAGGGACG
CCACCGTGGAGACGAAGACG

Downstream 100 bases:

>100_bases
CCGGCCCGGTCAGCCCCGCCCGGCGGGCAAAGTCCGGCCAGTGCGCCCACTCCGGCGCCGGACCTGGGATCATCGGAACG
GCCAGGAGACGTCCGACATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTVRTGRDERVVDLTEPAAEFVAGRGDGLLSVFIPHATAGVAILELGAGSDDDLLAALAALLPADDRWRHAHGSPGHGRS
HVMPAIIPPSLTVPVLDGRLALGTWQSVALVDLNVDNPERTVRFSFLPG

Sequences:

>Translated_129_residues
MTVRTGRDERVVDLTEPAAEFVAGRGDGLLSVFIPHATAGVAILELGAGSDDDLLAALAALLPADDRWRHAHGSPGHGRS
HVMPAIIPPSLTVPVLDGRLALGTWQSVALVDLNVDNPERTVRFSFLPG
>Mature_128_residues
TVRTGRDERVVDLTEPAAEFVAGRGDGLLSVFIPHATAGVAILELGAGSDDDLLAALAALLPADDRWRHAHGSPGHGRSH
VMPAIIPPSLTVPVLDGRLALGTWQSVALVDLNVDNPERTVRFSFLPG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 13590; Mature: 13458

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRTGRDERVVDLTEPAAEFVAGRGDGLLSVFIPHATAGVAILELGAGSDDDLLAALAA
CCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHH
LLPADDRWRHAHGSPGHGRSHVMPAIIPPSLTVPVLDGRLALGTWQSVALVDLNVDNPER
HCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCEEEECCCCEEEEEEECCCCCCC
TVRFSFLPG
EEEEEECCC
>Mature Secondary Structure 
TVRTGRDERVVDLTEPAAEFVAGRGDGLLSVFIPHATAGVAILELGAGSDDDLLAALAA
CCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHH
LLPADDRWRHAHGSPGHGRSHVMPAIIPPSLTVPVLDGRLALGTWQSVALVDLNVDNPER
HCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCEEEECCCCEEEEEEECCCCCCC
TVRFSFLPG
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]