| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963297
Identifier: 157963297
GI number: 157963297
Start: 4255188
End: 4255838
Strand: Direct
Name: 157963297
Synonym: Spea_3483
Alternate gene names: NA
Gene position: 4255188-4255838 (Clockwise)
Preceding gene: 157963296
Following gene: 157963298
Centisome position: 82.23
GC content: 47.47
Gene sequence:
>651_bases GTGGGATTTCTAAGCAGCCTATTTGGCAAAAAAGAGGAACCTAAACGTCAACTCGACCACCCAACAAAACTCAACAAGGG AGATATGATCTCCCTTGATGACAGTTTTGCGCTGCCGCCACAACTTCGTGGTCAGCAGCTGCGAGTTGAAGCGGTGAACA CCTATGAGTACCAGCGTAAACAACAGACTGAGTGGGTACTAAAGGGTCACAGTGGCGATGCCATTTTCCTCAGCCTTGAT GAAGATGACGAAACCTATCTGGCTCTCTCGATTAAGATCAGCCGCGGTCAGGTCGAACAGTTCTTCGATCTCGATCAGTT TAGCGATATCTTTGAAGAAGCTGGGAAAGCCGAGTTAGATACGCAAACTCTGTCACCAGACTTAAATGATTATGAACAGT GGTTATCGCCTCATTATCATCAAGTGACGACTGGAAGTTTTGGTTATTTCCATCGTCAAGATTATCGTGGCTTAAGACCT CCCCAAGACGCCGAAGGTGCAACGGGTGAGCCGTTTGAGTCCTATCAACTGCTTGACGATGACGAAGACAAGGCTGTCGA TGTTGAGGTCTATGAAAGCGGTGACACAGATGTAATGCTGACGCTCTATCGTCCCTTGTCCGATATCAGAGAATATTGGC CAGGCGCATAA
Upstream 100 bases:
>100_bases TGCACGACAAGCTAGCAGCAGCTGGTATTGGTGAGCAAAAGTCTAACGCTAACGCCGTACTTGACCGCATTAAAGCGCGT AAGGGCTAAAGGAGACTGAC
Downstream 100 bases:
>100_bases ATTAATGGTTCTAGATGTAAATCTAGAACCATTTTTGTTTCAACTCCGATGAGTGGTAGCATAGGAGAGATCCCGTAGCT TGTTAATACGGATTGGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGFLSSLFGKKEEPKRQLDHPTKLNKGDMISLDDSFALPPQLRGQQLRVEAVNTYEYQRKQQTEWVLKGHSGDAIFLSLD EDDETYLALSIKISRGQVEQFFDLDQFSDIFEEAGKAELDTQTLSPDLNDYEQWLSPHYHQVTTGSFGYFHRQDYRGLRP PQDAEGATGEPFESYQLLDDDEDKAVDVEVYESGDTDVMLTLYRPLSDIREYWPGA
Sequences:
>Translated_216_residues MGFLSSLFGKKEEPKRQLDHPTKLNKGDMISLDDSFALPPQLRGQQLRVEAVNTYEYQRKQQTEWVLKGHSGDAIFLSLD EDDETYLALSIKISRGQVEQFFDLDQFSDIFEEAGKAELDTQTLSPDLNDYEQWLSPHYHQVTTGSFGYFHRQDYRGLRP PQDAEGATGEPFESYQLLDDDEDKAVDVEVYESGDTDVMLTLYRPLSDIREYWPGA >Mature_215_residues GFLSSLFGKKEEPKRQLDHPTKLNKGDMISLDDSFALPPQLRGQQLRVEAVNTYEYQRKQQTEWVLKGHSGDAIFLSLDE DDETYLALSIKISRGQVEQFFDLDQFSDIFEEAGKAELDTQTLSPDLNDYEQWLSPHYHQVTTGSFGYFHRQDYRGLRPP QDAEGATGEPFESYQLLDDDEDKAVDVEVYESGDTDVMLTLYRPLSDIREYWPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24862; Mature: 24730
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLSSLFGKKEEPKRQLDHPTKLNKGDMISLDDSFALPPQLRGQQLRVEAVNTYEYQRK CCCHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHH QQTEWVLKGHSGDAIFLSLDEDDETYLALSIKISRGQVEQFFDLDQFSDIFEEAGKAELD HCCEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHCHHHHHHHHHHCCCCCCC TQTLSPDLNDYEQWLSPHYHQVTTGSFGYFHRQDYRGLRPPQDAEGATGEPFESYQLLDD HHHCCCCHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEDKAVDVEVYESGDTDVMLTLYRPLSDIREYWPGA CCCCEEEEEEEECCCCEEEEEEHHCHHHHHHHCCCC >Mature Secondary Structure GFLSSLFGKKEEPKRQLDHPTKLNKGDMISLDDSFALPPQLRGQQLRVEAVNTYEYQRK CCHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHH QQTEWVLKGHSGDAIFLSLDEDDETYLALSIKISRGQVEQFFDLDQFSDIFEEAGKAELD HCCEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHCHHHHHHHHHHCCCCCCC TQTLSPDLNDYEQWLSPHYHQVTTGSFGYFHRQDYRGLRPPQDAEGATGEPFESYQLLDD HHHCCCCHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEDKAVDVEVYESGDTDVMLTLYRPLSDIREYWPGA CCCCEEEEEEEECCCCEEEEEEHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA