| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963262
Identifier: 157963262
GI number: 157963262
Start: 4215242
End: 4215982
Strand: Direct
Name: 157963262
Synonym: Spea_3448
Alternate gene names: NA
Gene position: 4215242-4215982 (Clockwise)
Preceding gene: 157963261
Following gene: 157963265
Centisome position: 81.46
GC content: 50.07
Gene sequence:
>741_bases ATGCGCATTCGATTCAATGTGGGCCTAGAGCCTGAGCTCTTCGACTCCCACAGCTACGCCATTAAGTGCTTAAGGCTTTG GCAGCAAGAGGAAAAAGCGCGCAATGATGAGACCGATACAGTGCTACAGCGCCGGATCCAGTTTCATCGTGACCTGTATC TGTCGGGCTTATTTCTGCATGAATTGGCGCCGCAGTTGCCGTCCATGCTCACCCAAACCTTGCTGCAGGATAAGGTGAAC TGCCAAACCTTGGCATGCCAAATAAAATCGGCAGGCCTGAGCTTGGAGCCTGCTGCTGAGAGTGGCCTTTCAGAACCGCA GTGGCAAAAACTAAGCGCTATGCTAGAAGCCGCCAGTTCGGCTAAGCAGCAAAGCGAGCCGTCTAACTTAACTGCCATTG AGCAGCAATTAGCCCAGCTACAACAGCTAATGCTTGACGGGCAAGAACAGCTAAGCTCAGTGCTCACTCACGCCGAGGCA AGTCACGCTGCATCAAGTAACACAGAGTCAAATCAACCAGAGTTAGGCGCTGAAAATGGCCAGCAACAGGTAGATTTTAC CAGCCAGTTTAATCAACTTAAGCAGGGCCAAGAAAAGTTAATGGCGCAGATGAAAAGCTTATCTAGCCAATTAGCTCAAG TATCTGGCACTGCTCTTGCTAATAAGCCAGCTAATGACACTCCCAGTTTAGAGACTCAACTGGAACGCGCTAGACGGGTA AAATCCAAAGGACTCTGGTAG
Upstream 100 bases:
>100_bases TGAAAAAATCGTCATGATAAAAGATCCACAAGAGGCGCTATCGCGTGAGATCTGTTGCTACCACGCAGCTGATAGCAGCG ACGCGGCTTAAGAGGTAATT
Downstream 100 bases:
>100_bases CCATTCTTTGGCTTTATACCAAGCTTAAAAATAGAAAATCCACCTCGTTAGGGTGGATTTTTTTGGCTTGAACTTTGCGT TCTTTAGCGAGCAAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRIRFNVGLEPELFDSHSYAIKCLRLWQQEEKARNDETDTVLQRRIQFHRDLYLSGLFLHELAPQLPSMLTQTLLQDKVN CQTLACQIKSAGLSLEPAAESGLSEPQWQKLSAMLEAASSAKQQSEPSNLTAIEQQLAQLQQLMLDGQEQLSSVLTHAEA SHAASSNTESNQPELGAENGQQQVDFTSQFNQLKQGQEKLMAQMKSLSSQLAQVSGTALANKPANDTPSLETQLERARRV KSKGLW
Sequences:
>Translated_246_residues MRIRFNVGLEPELFDSHSYAIKCLRLWQQEEKARNDETDTVLQRRIQFHRDLYLSGLFLHELAPQLPSMLTQTLLQDKVN CQTLACQIKSAGLSLEPAAESGLSEPQWQKLSAMLEAASSAKQQSEPSNLTAIEQQLAQLQQLMLDGQEQLSSVLTHAEA SHAASSNTESNQPELGAENGQQQVDFTSQFNQLKQGQEKLMAQMKSLSSQLAQVSGTALANKPANDTPSLETQLERARRV KSKGLW >Mature_246_residues MRIRFNVGLEPELFDSHSYAIKCLRLWQQEEKARNDETDTVLQRRIQFHRDLYLSGLFLHELAPQLPSMLTQTLLQDKVN CQTLACQIKSAGLSLEPAAESGLSEPQWQKLSAMLEAASSAKQQSEPSNLTAIEQQLAQLQQLMLDGQEQLSSVLTHAEA SHAASSNTESNQPELGAENGQQQVDFTSQFNQLKQGQEKLMAQMKSLSSQLAQVSGTALANKPANDTPSLETQLERARRV KSKGLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27374; Mature: 27374
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRFNVGLEPELFDSHSYAIKCLRLWQQEEKARNDETDTVLQRRIQFHRDLYLSGLFLH CEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELAPQLPSMLTQTLLQDKVNCQTLACQIKSAGLSLEPAAESGLSEPQWQKLSAMLEAASS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH AKQQSEPSNLTAIEQQLAQLQQLMLDGQEQLSSVLTHAEASHAASSNTESNQPELGAENG HHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QQQVDFTSQFNQLKQGQEKLMAQMKSLSSQLAQVSGTALANKPANDTPSLETQLERARRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHH KSKGLW HHCCCC >Mature Secondary Structure MRIRFNVGLEPELFDSHSYAIKCLRLWQQEEKARNDETDTVLQRRIQFHRDLYLSGLFLH CEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELAPQLPSMLTQTLLQDKVNCQTLACQIKSAGLSLEPAAESGLSEPQWQKLSAMLEAASS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH AKQQSEPSNLTAIEQQLAQLQQLMLDGQEQLSSVLTHAEASHAASSNTESNQPELGAENG HHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QQQVDFTSQFNQLKQGQEKLMAQMKSLSSQLAQVSGTALANKPANDTPSLETQLERARRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHH KSKGLW HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA