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The map label for this gene is ydbT [H]

Identifier: 157963168

GI number: 157963168

Start: 4096403

End: 4097917

Strand: Direct

Name: ydbT [H]

Synonym: Spea_3352

Alternate gene names: 157963168

Gene position: 4096403-4097917 (Clockwise)

Preceding gene: 157963167

Following gene: 157963169

Centisome position: 79.16

GC content: 45.81

Gene sequence:

>1515_bases
ATGACTCATAAATTTTCACAGTGGTCTTCGCTATCGGCTTGGTCAATCATCAGCTTTACCCTACTAACAACACGGCAGTT
ATTGAGCAGTGGCTACGCCCTTATTCCAGTTGTCTACACGGGTTGGCAACAAGGATTTAGTAGCCCCTGGGTCATCATCG
CAATCCTAGCTGTGGTAGGCCTCATCTTTGTCTTTAGTGTTCTGCAGTGGCTAAAGTTTCGCTTTAAAATCGAAACCGAT
AAGCTCAATATCAAACACGGTATTGTGTTTAAAAAAGCCGATGAACTGCCCTTCAGTAAAATTCAAAACGTGCGCTTAGA
GCAGCCGCTTTACTTCCGCCCCATGGGCCTCTACCGCCTCGTTGTCGAAACCGCAGGCTCTAAAGAAAATGAAGCCGAAC
TATCGGCATTAGCTTACAAAGATGCCCTAACCCTTAAAAAGCAGTTAATGGCAGAGCATGATGCCCATCCCCAGCAAAGT
GAGCACTCCCGTACCCCATCACAAGGCCAACATACATCTAAACAAGTTAAGACTATTAGCCGTAAGAGCCTTAAACAGCT
AGTACTATTTGGGCTTTATCAAAATAATGCCATTTGGCTAGCCGTCATTTTAGGGCCAATCTTCGGTCAACTCGATTGGG
AGTCGATGGAAAACCTACAATTGATGCAATCATTTATGGCCTGGTATGACAAGCATATTGCTGTCAGCCTGATGCTACAG
TTCATCTTCGCCGTTATGGCACTGGTGGGTTTCTATCTGCTATTTTCACTGCTTTCTATCGCCTCTGCCGTGTTGAAATA
CTCGCCTTACCGATTAAGTCGTAGTGGTAATACGCTACATCGCACCGGCGGCATTATTGCTAAGCAAAACGATGCCTTGG
CGATAAGGCGCATACAGGTGATTAAATTCTATCAGCCATTGATAGGCCGCTTACTTAAGCTTTGGACTGTGTACTTTAAA
CAGGTTCAGGGTCATGAAGTCGAGCAGCGTGGCTCGACTAATATGCTGGTTCCCAGCATGAGCCGTGGTGAAATTGCTCT
ACTTCTCCCCGAGCTAAAGGGCGTTGAAGCCAGCTCGACTCAGCTACCCAAGCAATATCAACACATTCATCTTGGCTGGT
TCTGGCGCCGTGGGTTATTGCCATTATTAGTGCCCGCTATCAACACCTATTTTCTTGGCTTAAACCTGTTTACCGATCTG
CTGTGGATAGGTGCAATTTTATTATGTAGCGGGATCTATTTAAGGTATCGACAGTATGGCTATCACCTAGAAGGTAATGA
CCTTTGGTTTCACTCAGGATTGCTTGGTCACAGCTGGCAACTTATCGCGTTGGCTAAGGTTCAACATGTATCAATAACAC
AGTCCCCCAATCAAAAACGAAGTGGCTTGGCTAACCTTGAAATTGGCCTCGCCAGTGGTACAGTTAAGCTGCCTTATATC
TCTATCATTGCGGCGCGAGAAATTGCAGAGCGATCCCTCGTGCTTATTCATAACGACCATCGAAACTGGATATAG

Upstream 100 bases:

>100_bases
CAAGCGGCGAAAGCCAATCCGCAACTACCGTTAGAAATGGCTTCGCAACAGAAGGAACTTGAAGATACCCCACAGACCAT
CACTCCGGAAAGGTCTAACG

Downstream 100 bases:

>100_bases
CCATGAACAGACTAGCCACAGAGCACACATCGGCGCAGCCAATTACCCCTGATATGATTATTCACTTCTGGTTTGAAGAG
ATTGAGCCGAAACAGTGGTG

Product: membrane-flanked domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTHKFSQWSSLSAWSIISFTLLTTRQLLSSGYALIPVVYTGWQQGFSSPWVIIAILAVVGLIFVFSVLQWLKFRFKIETD
KLNIKHGIVFKKADELPFSKIQNVRLEQPLYFRPMGLYRLVVETAGSKENEAELSALAYKDALTLKKQLMAEHDAHPQQS
EHSRTPSQGQHTSKQVKTISRKSLKQLVLFGLYQNNAIWLAVILGPIFGQLDWESMENLQLMQSFMAWYDKHIAVSLMLQ
FIFAVMALVGFYLLFSLLSIASAVLKYSPYRLSRSGNTLHRTGGIIAKQNDALAIRRIQVIKFYQPLIGRLLKLWTVYFK
QVQGHEVEQRGSTNMLVPSMSRGEIALLLPELKGVEASSTQLPKQYQHIHLGWFWRRGLLPLLVPAINTYFLGLNLFTDL
LWIGAILLCSGIYLRYRQYGYHLEGNDLWFHSGLLGHSWQLIALAKVQHVSITQSPNQKRSGLANLEIGLASGTVKLPYI
SIIAAREIAERSLVLIHNDHRNWI

Sequences:

>Translated_504_residues
MTHKFSQWSSLSAWSIISFTLLTTRQLLSSGYALIPVVYTGWQQGFSSPWVIIAILAVVGLIFVFSVLQWLKFRFKIETD
KLNIKHGIVFKKADELPFSKIQNVRLEQPLYFRPMGLYRLVVETAGSKENEAELSALAYKDALTLKKQLMAEHDAHPQQS
EHSRTPSQGQHTSKQVKTISRKSLKQLVLFGLYQNNAIWLAVILGPIFGQLDWESMENLQLMQSFMAWYDKHIAVSLMLQ
FIFAVMALVGFYLLFSLLSIASAVLKYSPYRLSRSGNTLHRTGGIIAKQNDALAIRRIQVIKFYQPLIGRLLKLWTVYFK
QVQGHEVEQRGSTNMLVPSMSRGEIALLLPELKGVEASSTQLPKQYQHIHLGWFWRRGLLPLLVPAINTYFLGLNLFTDL
LWIGAILLCSGIYLRYRQYGYHLEGNDLWFHSGLLGHSWQLIALAKVQHVSITQSPNQKRSGLANLEIGLASGTVKLPYI
SIIAAREIAERSLVLIHNDHRNWI
>Mature_503_residues
THKFSQWSSLSAWSIISFTLLTTRQLLSSGYALIPVVYTGWQQGFSSPWVIIAILAVVGLIFVFSVLQWLKFRFKIETDK
LNIKHGIVFKKADELPFSKIQNVRLEQPLYFRPMGLYRLVVETAGSKENEAELSALAYKDALTLKKQLMAEHDAHPQQSE
HSRTPSQGQHTSKQVKTISRKSLKQLVLFGLYQNNAIWLAVILGPIFGQLDWESMENLQLMQSFMAWYDKHIAVSLMLQF
IFAVMALVGFYLLFSLLSIASAVLKYSPYRLSRSGNTLHRTGGIIAKQNDALAIRRIQVIKFYQPLIGRLLKLWTVYFKQ
VQGHEVEQRGSTNMLVPSMSRGEIALLLPELKGVEASSTQLPKQYQHIHLGWFWRRGLLPLLVPAINTYFLGLNLFTDLL
WIGAILLCSGIYLRYRQYGYHLEGNDLWFHSGLLGHSWQLIALAKVQHVSITQSPNQKRSGLANLEIGLASGTVKLPYIS
IIAAREIAERSLVLIHNDHRNWI

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 57432; Mature: 57301

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHKFSQWSSLSAWSIISFTLLTTRQLLSSGYALIPVVYTGWQQGFSSPWVIIAILAVVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHEEECHHHCCCCCHHHHHHHHHHH
LIFVFSVLQWLKFRFKIETDKLNIKHGIVFKKADELPFSKIQNVRLEQPLYFRPMGLYRL
HHHHHHHHHHHHHHEEEECCCEEEEECEEEEECCCCCHHHHCCCCCCCCCEECCHHHHHH
VVETAGSKENEAELSALAYKDALTLKKQLMAEHDAHPQQSEHSRTPSQGQHTSKQVKTIS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHH
RKSLKQLVLFGLYQNNAIWLAVILGPIFGQLDWESMENLQLMQSFMAWYDKHIAVSLMLQ
HHHHHHHHHHHEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIFAVMALVGFYLLFSLLSIASAVLKYSPYRLSRSGNTLHRTGGIIAKQNDALAIRRIQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEEECCCCHHHHHHHH
IKFYQPLIGRLLKLWTVYFKQVQGHEVEQRGSTNMLVPSMSRGEIALLLPELKGVEASST
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCCCEEEEECCCCCCCCCCC
QLPKQYQHIHLGWFWRRGLLPLLVPAINTYFLGLNLFTDLLWIGAILLCSGIYLRYRQYG
CCCHHHCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YHLEGNDLWFHSGLLGHSWQLIALAKVQHVSITQSPNQKRSGLANLEIGLASGTVKLPYI
CEECCCCEEEECCCCCCCEEEEEEEEEEEEEEECCCCHHHCCCCEEEEEECCCEEECCHH
SIIAAREIAERSLVLIHNDHRNWI
HHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure 
THKFSQWSSLSAWSIISFTLLTTRQLLSSGYALIPVVYTGWQQGFSSPWVIIAILAVVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHEEECHHHCCCCCHHHHHHHHHHH
LIFVFSVLQWLKFRFKIETDKLNIKHGIVFKKADELPFSKIQNVRLEQPLYFRPMGLYRL
HHHHHHHHHHHHHHEEEECCCEEEEECEEEEECCCCCHHHHCCCCCCCCCEECCHHHHHH
VVETAGSKENEAELSALAYKDALTLKKQLMAEHDAHPQQSEHSRTPSQGQHTSKQVKTIS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHH
RKSLKQLVLFGLYQNNAIWLAVILGPIFGQLDWESMENLQLMQSFMAWYDKHIAVSLMLQ
HHHHHHHHHHHEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIFAVMALVGFYLLFSLLSIASAVLKYSPYRLSRSGNTLHRTGGIIAKQNDALAIRRIQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCEEEECCCCHHHHHHHH
IKFYQPLIGRLLKLWTVYFKQVQGHEVEQRGSTNMLVPSMSRGEIALLLPELKGVEASST
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECCCCCCCCEEEEECCCCCCCCCCC
QLPKQYQHIHLGWFWRRGLLPLLVPAINTYFLGLNLFTDLLWIGAILLCSGIYLRYRQYG
CCCHHHCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YHLEGNDLWFHSGLLGHSWQLIALAKVQHVSITQSPNQKRSGLANLEIGLASGTVKLPYI
CEECCCCEEEECCCCCCCEEEEEEEEEEEEEEECCCCHHHCCCCEEEEEECCCEEECCHH
SIIAAREIAERSLVLIHNDHRNWI
HHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]