Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963135

Identifier: 157963135

GI number: 157963135

Start: 4059695

End: 4060237

Strand: Direct

Name: 157963135

Synonym: Spea_3319

Alternate gene names: NA

Gene position: 4059695-4060237 (Clockwise)

Preceding gene: 157963133

Following gene: 157963136

Centisome position: 78.45

GC content: 43.09

Gene sequence:

>543_bases
ATGGATAGCATCTCTATTTCCATTCTGGTCTTTTTCAGTCTACTTTGCTTGAGCATTGCTTCGCTTATCTGGCTAAAAAT
CAAAGGCAAGATCATCCCTAATGGCGTGATTGTGGTACTTGGTTTTATGGCAATGTGTGTCGGCAGTGTATTTGCTTTTA
TTAACTACGGCGAAGATTACGACGCCTACAAAAAGCTGCATTGGCAAACCTTAACACCTAGTCAAATTCAACCTCTTGTA
GACCAAGGTTACACTGTATTTGTTGATGTAACGGCAGATTGGTGCAACATCTGTTATGCCAACAAAGTTGGTGTTACCCA
CAGAGAAAAAATAGTTAACGCCCTAGCTGCAGACAATATTATTTTAATGTTGGGTGACTGGACTGAGCCTAATGCAGTCG
TTGAAGATTATATGCGAATGCAAGGTCGCGGCGGCACGCCTTATAATAAAGTCTACGGCCCTGGAGCACCTGACGGCATC
ATACTGCCCACCCAGCTGACGATGGAATCTGTTCTACAAGGGCTACAAAAGGCTAAAATCTAA

Upstream 100 bases:

>100_bases
TTTCATTTAACTGATGCAGAATAGGTCATTAATTGCGTTTAAGCTGGCTACGCACAGTTATCACAAATCAATAGTCATTG
TTTCATTTTATGGAGTTTTC

Downstream 100 bases:

>100_bases
AGGTCATCAATTTAGGTCTCCTATCGCTGCGTTACAATAAAAACAATAAGGTCACGTTATTTCGTGGCCTTATTTTTTTA
GCTATCACTTTTGCGTATAC

Product: thiol:disulfide interchange protein

Products: NA

Alternate protein names: ThiolDisulfide Interchange Protein; Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; C-Type Cytochrome Biogenesis Protein; Metal Resistance Protein; ThiolDisulfide Interchange; Protein-Disulfide Reductase; Copper-Sensitivity B Suppressor; ThiolDisulfide Interchange Protein-Like Protein; ThiODisulfide Interchange Protein; Cytochrome C Biogenesis Transmembrane Protein; Thioredoxin DsbD Family; Thiol-Disulfide Interchange Protein-Like Protein; Copper-Sensitivity Suppressor B Protein; Thioredoxin-Like Protein; Copper Sensitivity Suppressor Membrane Protein B; Thiol-Disulfide Interchange Protein DsbD-Like Protein; DsbD Family Thioredoxin

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV
DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI
ILPTQLTMESVLQGLQKAKI

Sequences:

>Translated_180_residues
MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV
DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI
ILPTQLTMESVLQGLQKAKI
>Mature_180_residues
MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDYDAYKKLHWQTLTPSQIQPLV
DQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNIILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGI
ILPTQLTMESVLQGLQKAKI

Specific function: Unknown

COG id: COG4232

COG function: function code OC; Thiol:disulfide interchange protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19867; Mature: 19867

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DAYKKLHWQTLTPSQIQPLVDQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNI
HHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHCCE
ILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGIILPTQLTMESVLQGLQKAKI
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSISISILVFFSLLCLSIASLIWLKIKGKIIPNGVIVVLGFMAMCVGSVFAFINYGEDY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DAYKKLHWQTLTPSQIQPLVDQGYTVFVDVTADWCNICYANKVGVTHREKIVNALAADNI
HHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHCCE
ILMLGDWTEPNAVVEDYMRMQGRGGTPYNKVYGPGAPDGIILPTQLTMESVLQGLQKAKI
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA