| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962777
Identifier: 157962777
GI number: 157962777
Start: 3622066
End: 3622743
Strand: Direct
Name: 157962777
Synonym: Spea_2959
Alternate gene names: NA
Gene position: 3622066-3622743 (Clockwise)
Preceding gene: 157962775
Following gene: 157962778
Centisome position: 70.0
GC content: 45.87
Gene sequence:
>678_bases ATGAGCGAATTTACTCCTGAGTGTTTTAATTTCTTAAACCTACTTTCGGTTAATAACGACAGAGAGTGGTTTAAAGCCAA TCAACAACAATATGAAGATAAAGTCCGCACCCCGGCATTAAAGTTTATCGAAGCCATGCAGCCGCATATTCTTGGGCTAT CGCCGCGATTAACCGCTGTGCCTAAAAAAGTCGGCGGCAGCATGATGCGCCCTCAACGTGATAGTCGCTTTAGTAAAGAT AAGACGCCCTATAAAACCAATGTCGGCATTCAGTTTAGGCATTTTCAGGGCAAAGATGTACACGCCCCAGGCTTGTACCT ACACATTGCCAACGATGGCTGCTTTATTGGCGCAGGAATTTGGCATCCAGAATCTAAGACCCTAAACGCCATTAGAAGCT GCATAGATGAAAACCCCAATGGCTATAAAAAAGCGCTGCGTGAATTAACAGCCCAAGGTTTTGAGATGCAAGGCAGCACG CTTATTCGCCCACCAAAAGGCTATGACAAAAACCATCCAATGTTAGAGGAGCTTAAGCGCAAAGACTTTATCGCCATAAA GCCGCTAAGTATCGAGCAAGTGTGTGCACCTGAGTTTGTCGATGTTTGCGCCCGAGAGTTCGCCGCATGCCAGCAACTGA TGCGCTACTTGTGCTTTGCGTTAGATCTCGATTACTAA
Upstream 100 bases:
>100_bases TTAGCCAAAGCCGCCAATAAAAACTAGATAAAATACACCTGCCTAAGATATGATTTCGCTATATGCCTCTTCTATAAATT ACAGCTAGGTCGTTATTCCT
Downstream 100 bases:
>100_bases GGCCCTCCTATCTAGCAGGCGTTTCTATCAAGCGCCTCTACACGCAAGTGTAATCTCTGCTACAATTGCGCCAGTTTTAA TTTCCAGCCAATTTAGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSEFTPECFNFLNLLSVNNDREWFKANQQQYEDKVRTPALKFIEAMQPHILGLSPRLTAVPKKVGGSMMRPQRDSRFSKD KTPYKTNVGIQFRHFQGKDVHAPGLYLHIANDGCFIGAGIWHPESKTLNAIRSCIDENPNGYKKALRELTAQGFEMQGST LIRPPKGYDKNHPMLEELKRKDFIAIKPLSIEQVCAPEFVDVCAREFAACQQLMRYLCFALDLDY
Sequences:
>Translated_225_residues MSEFTPECFNFLNLLSVNNDREWFKANQQQYEDKVRTPALKFIEAMQPHILGLSPRLTAVPKKVGGSMMRPQRDSRFSKD KTPYKTNVGIQFRHFQGKDVHAPGLYLHIANDGCFIGAGIWHPESKTLNAIRSCIDENPNGYKKALRELTAQGFEMQGST LIRPPKGYDKNHPMLEELKRKDFIAIKPLSIEQVCAPEFVDVCAREFAACQQLMRYLCFALDLDY >Mature_224_residues SEFTPECFNFLNLLSVNNDREWFKANQQQYEDKVRTPALKFIEAMQPHILGLSPRLTAVPKKVGGSMMRPQRDSRFSKDK TPYKTNVGIQFRHFQGKDVHAPGLYLHIANDGCFIGAGIWHPESKTLNAIRSCIDENPNGYKKALRELTAQGFEMQGSTL IRPPKGYDKNHPMLEELKRKDFIAIKPLSIEQVCAPEFVDVCAREFAACQQLMRYLCFALDLDY
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25776; Mature: 25645
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFTPECFNFLNLLSVNNDREWFKANQQQYEDKVRTPALKFIEAMQPHILGLSPRLTAV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHH PKKVGGSMMRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIANDGCFIGAGI HHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCC WHPESKTLNAIRSCIDENPNGYKKALRELTAQGFEMQGSTLIRPPKGYDKNHPMLEELKR CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHH KDFIAIKPLSIEQVCAPEFVDVCAREFAACQQLMRYLCFALDLDY CCCEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEFTPECFNFLNLLSVNNDREWFKANQQQYEDKVRTPALKFIEAMQPHILGLSPRLTAV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHH PKKVGGSMMRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIANDGCFIGAGI HHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCC WHPESKTLNAIRSCIDENPNGYKKALRELTAQGFEMQGSTLIRPPKGYDKNHPMLEELKR CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHH KDFIAIKPLSIEQVCAPEFVDVCAREFAACQQLMRYLCFALDLDY CCCEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA