| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962775
Identifier: 157962775
GI number: 157962775
Start: 3619205
End: 3621316
Strand: Direct
Name: 157962775
Synonym: Spea_2957
Alternate gene names: NA
Gene position: 3619205-3621316 (Clockwise)
Preceding gene: 157962772
Following gene: 157962777
Centisome position: 69.94
GC content: 43.66
Gene sequence:
>2112_bases ATGAAAAAGTTAAGCTTACTTGCCGCCTCTATCGGCATCATTTTAGCAGGTTGTAGCAGTGATGATGACAATGCCATTAG CACGTTTGAAGTTAAAGCTATCGACGGCTATCTAGTTAACGCCGATATCTACGCGGGCGACAAGTGCGACACAAAGGCTG GCGTCACCGATGAGCGCGGCATAGCTAAAATCGATGAAAAATTCAAAGACCAAAAACTGTGTGTTAAAGCTGTTGTAGGA CAAACAATTGATAGCGACCGCGGCATTGTCACCAAAGCATTCGAATTATCGGCTCCAGCTGACTCTACGGTTATCAACCC GATGACCAACCTTGTTGTAGAGAAAATGCAGGCAACACCAAGTCTAACGGCTGAAGATGCAAAAGCTGAAGTTACCAAGC AATTCGCGGCACTAAACGCTAAGCCAGAGCAGTTATTTGGTGACTACATTGCTGACGCCAATGCTGGCAATAAAGTCGCA GAAGGTATCAAGGTTATCGGCGAGACCTTAGTCGATGCGCAAGTAGAAGACACTGATGTTTCTGAAGTGATTTTAGACGA CTTAGTGACTGATGTTGCTGACAAAGTTGAAAGTAATGAAGACCTTGACGATTACGCACCAGTAATTGATAAAGAAGAAG GCTTCAAACCAAACCACAGACCAAACATCACTTTAACTGACGCAGAGCAAGATAAGCTTGAAGAAATTAAGCTTGAACTT GGTCAAACTATTGCAACTATCGAGCTATTGTCAGCCTTTGACGATAAAGATAATGATCTGTTAACTCTTGAAGTTAAGAG CGAAGATGGCGAAACATTGGCTGAACTAGGCCTAGCATTCAACAGCGACACAGGTCTACTTAGCGGTAAACCATTAACAG CAGGTGAGATTGAGCTACATGTCTATGCGACAGACAGCAAAGGTGCTCGCTCATACCCACTAGAAATCGAAATCGATGTT ACTAGCCCGAACTCTGCACCAACTATCGATAATGAAGAAAAATCTGAAATTGAAGCTGAGCTAAAAGAGTTAAACCTAAC TCAAGGTGACACTGTCGATGCAACAATCGAACTTGACGATCTGTTTAACGATGTCGATGAAGATGCACTTAAGCTAGTTG CAACCACTGACATGCAAGGCGTAACGCTTAAGATTGAGCAACAAGACGACCTGCATCTAACGGGCACGCCAGAACTTGCT GGTGAGTTCACCATCACAGTAACGGCTGATGATGGCATTAATGCTGCTGTTAAAGCAGAGCTAAAAGTTACTGTTGCTAA TAACGACATCACGCCAGATCCTGAAGTACATCCACTGGAAGGCAAGAATTGGTATGTGCTAGAGCACGGCAGTGATGATG GTGTTGATAACAGCTCAGATTTCCAACGTGTTTGGTGTGAAACTTATAAGTTCGTAGACGGTAACGTGTTGATGAACAAG CGTAATCTAAGTAACTTAACCGAATGTGCTGCAGAAACAACTGAAAAAGTCGGTACCTATACAGTCAACGGTGACAAGCT TGAAGCTAGCTTTGTGATGGAAGGTGGTGTGGCAGAAGCCTCAACTATCACAGCTAAGCCTGCATTAAATGGCATTGGCG CTGGCGCTGGCGCACAAACTGTTGCTATTCATGGTGAGCGTTATACCTTCTTCAAAAACGATGATGACGCAGAGAAACGT CTCGATATCGAATCTGATGACAATGCAAACGATCGTAGCTTCGCCATTGAAATGCCTGCTCTTGAACAAGAAGATGAGCA AAACATCCAGTACAACCTAGTACAGATCAGCTTACAGACCAACGATATGGGTGATGACGTTGATATGTACTTTGATCTTC CAGGCAAAGACCTAACCTGTGAAGAAGTTAGCGAATTCTATAACCCAACACTAACAGCAATAGGTCTACCTAAATACGGT GTTTCAGCTCAGCTAATGGACAATGATAGCGAAGAGTTTAACTTCTGTGTTGCTCAATTCACCATTAACGAAACAGTTCC AACGGGCACTATCTTCAGCATTATTGGCCAACTAAAGTATGACGACGATGCTGGCATTGTTGAGCCAATCAAGGCTAACA TCGAATGGACAGGTGAAGCCGATAACGAATAA
Upstream 100 bases:
>100_bases AATACTCACTCTACTATCCTCAGCTAGAATCCTTACGCCATTTACTTACCGAATGGTGTTTCCTATGAGCCTAAGCGCTC ATTCCTAACTAGGATTTACA
Downstream 100 bases:
>100_bases CTCGTTAAAACAGGTTTAAGTTCATACAAAAAGGAGAGCTTCTGCTCTCCTTTTCTATTCTGCCAATTTTAGAGTTGGCC AAATCTACTATTAACTATTA
Product: dystroglycan-type cadherin domain-containing protein
Products: NA
Alternate protein names: Acid Phosphatase; Dystroglycan-Type Cadherin Domain-Containing Protein
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MKKLSLLAASIGIILAGCSSDDDNAISTFEVKAIDGYLVNADIYAGDKCDTKAGVTDERGIAKIDEKFKDQKLCVKAVVG QTIDSDRGIVTKAFELSAPADSTVINPMTNLVVEKMQATPSLTAEDAKAEVTKQFAALNAKPEQLFGDYIADANAGNKVA EGIKVIGETLVDAQVEDTDVSEVILDDLVTDVADKVESNEDLDDYAPVIDKEEGFKPNHRPNITLTDAEQDKLEEIKLEL GQTIATIELLSAFDDKDNDLLTLEVKSEDGETLAELGLAFNSDTGLLSGKPLTAGEIELHVYATDSKGARSYPLEIEIDV TSPNSAPTIDNEEKSEIEAELKELNLTQGDTVDATIELDDLFNDVDEDALKLVATTDMQGVTLKIEQQDDLHLTGTPELA GEFTITVTADDGINAAVKAELKVTVANNDITPDPEVHPLEGKNWYVLEHGSDDGVDNSSDFQRVWCETYKFVDGNVLMNK RNLSNLTECAAETTEKVGTYTVNGDKLEASFVMEGGVAEASTITAKPALNGIGAGAGAQTVAIHGERYTFFKNDDDAEKR LDIESDDNANDRSFAIEMPALEQEDEQNIQYNLVQISLQTNDMGDDVDMYFDLPGKDLTCEEVSEFYNPTLTAIGLPKYG VSAQLMDNDSEEFNFCVAQFTINETVPTGTIFSIIGQLKYDDDAGIVEPIKANIEWTGEADNE
Sequences:
>Translated_703_residues MKKLSLLAASIGIILAGCSSDDDNAISTFEVKAIDGYLVNADIYAGDKCDTKAGVTDERGIAKIDEKFKDQKLCVKAVVG QTIDSDRGIVTKAFELSAPADSTVINPMTNLVVEKMQATPSLTAEDAKAEVTKQFAALNAKPEQLFGDYIADANAGNKVA EGIKVIGETLVDAQVEDTDVSEVILDDLVTDVADKVESNEDLDDYAPVIDKEEGFKPNHRPNITLTDAEQDKLEEIKLEL GQTIATIELLSAFDDKDNDLLTLEVKSEDGETLAELGLAFNSDTGLLSGKPLTAGEIELHVYATDSKGARSYPLEIEIDV TSPNSAPTIDNEEKSEIEAELKELNLTQGDTVDATIELDDLFNDVDEDALKLVATTDMQGVTLKIEQQDDLHLTGTPELA GEFTITVTADDGINAAVKAELKVTVANNDITPDPEVHPLEGKNWYVLEHGSDDGVDNSSDFQRVWCETYKFVDGNVLMNK RNLSNLTECAAETTEKVGTYTVNGDKLEASFVMEGGVAEASTITAKPALNGIGAGAGAQTVAIHGERYTFFKNDDDAEKR LDIESDDNANDRSFAIEMPALEQEDEQNIQYNLVQISLQTNDMGDDVDMYFDLPGKDLTCEEVSEFYNPTLTAIGLPKYG VSAQLMDNDSEEFNFCVAQFTINETVPTGTIFSIIGQLKYDDDAGIVEPIKANIEWTGEADNE >Mature_703_residues MKKLSLLAASIGIILAGCSSDDDNAISTFEVKAIDGYLVNADIYAGDKCDTKAGVTDERGIAKIDEKFKDQKLCVKAVVG QTIDSDRGIVTKAFELSAPADSTVINPMTNLVVEKMQATPSLTAEDAKAEVTKQFAALNAKPEQLFGDYIADANAGNKVA EGIKVIGETLVDAQVEDTDVSEVILDDLVTDVADKVESNEDLDDYAPVIDKEEGFKPNHRPNITLTDAEQDKLEEIKLEL GQTIATIELLSAFDDKDNDLLTLEVKSEDGETLAELGLAFNSDTGLLSGKPLTAGEIELHVYATDSKGARSYPLEIEIDV TSPNSAPTIDNEEKSEIEAELKELNLTQGDTVDATIELDDLFNDVDEDALKLVATTDMQGVTLKIEQQDDLHLTGTPELA GEFTITVTADDGINAAVKAELKVTVANNDITPDPEVHPLEGKNWYVLEHGSDDGVDNSSDFQRVWCETYKFVDGNVLMNK RNLSNLTECAAETTEKVGTYTVNGDKLEASFVMEGGVAEASTITAKPALNGIGAGAGAQTVAIHGERYTFFKNDDDAEKR LDIESDDNANDRSFAIEMPALEQEDEQNIQYNLVQISLQTNDMGDDVDMYFDLPGKDLTCEEVSEFYNPTLTAIGLPKYG VSAQLMDNDSEEFNFCVAQFTINETVPTGTIFSIIGQLKYDDDAGIVEPIKANIEWTGEADNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76201; Mature: 76201
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSLLAASIGIILAGCSSDDDNAISTFEVKAIDGYLVNADIYAGDKCDTKAGVTDERG CCHHHHHHEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCC IAKIDEKFKDQKLCVKAVVGQTIDSDRGIVTKAFELSAPADSTVINPMTNLVVEKMQATP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC SLTAEDAKAEVTKQFAALNAKPEQLFGDYIADANAGNKVAEGIKVIGETLVDAQVEDTDV CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCH SEVILDDLVTDVADKVESNEDLDDYAPVIDKEEGFKPNHRPNITLTDAEQDKLEEIKLEL HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH GQTIATIELLSAFDDKDNDLLTLEVKSEDGETLAELGLAFNSDTGLLSGKPLTAGEIELH CCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCEECCCCCCCCCCCCCCCEEEEE VYATDSKGARSYPLEIEIDVTSPNSAPTIDNEEKSEIEAELKELNLTQGDTVDATIELDD EEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHH LFNDVDEDALKLVATTDMQGVTLKIEQQDDLHLTGTPELAGEFTITVTADDGINAAVKAE HHCCCCHHHEEEEEECCCCCEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEEE LKVTVANNDITPDPEVHPLEGKNWYVLEHGSDDGVDNSSDFQRVWCETYKFVDGNVLMNK EEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEEECCEEEEEC RNLSNLTECAAETTEKVGTYTVNGDKLEASFVMEGGVAEASTITAKPALNGIGAGAGAQT CCHHHHHHHHHHHHHHCCEEEECCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEE VAIHGERYTFFKNDDDAEKRLDIESDDNANDRSFAIEMPALEQEDEQNIQYNLVQISLQT EEEECCEEEEECCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC NDMGDDVDMYFDLPGKDLTCEEVSEFYNPTLTAIGLPKYGVSAQLMDNDSEEFNFCVAQF CCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEE TINETVPTGTIFSIIGQLKYDDDAGIVEPIKANIEWTGEADNE EECCCCCCCHHHHHHHCEEECCCCCCCCEEECCEEEECCCCCC >Mature Secondary Structure MKKLSLLAASIGIILAGCSSDDDNAISTFEVKAIDGYLVNADIYAGDKCDTKAGVTDERG CCHHHHHHEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCC IAKIDEKFKDQKLCVKAVVGQTIDSDRGIVTKAFELSAPADSTVINPMTNLVVEKMQATP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC SLTAEDAKAEVTKQFAALNAKPEQLFGDYIADANAGNKVAEGIKVIGETLVDAQVEDTDV CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCH SEVILDDLVTDVADKVESNEDLDDYAPVIDKEEGFKPNHRPNITLTDAEQDKLEEIKLEL HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH GQTIATIELLSAFDDKDNDLLTLEVKSEDGETLAELGLAFNSDTGLLSGKPLTAGEIELH CCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCEECCCCCCCCCCCCCCCEEEEE VYATDSKGARSYPLEIEIDVTSPNSAPTIDNEEKSEIEAELKELNLTQGDTVDATIELDD EEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHH LFNDVDEDALKLVATTDMQGVTLKIEQQDDLHLTGTPELAGEFTITVTADDGINAAVKAE HHCCCCHHHEEEEEECCCCCEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEEE LKVTVANNDITPDPEVHPLEGKNWYVLEHGSDDGVDNSSDFQRVWCETYKFVDGNVLMNK EEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEEECCEEEEEC RNLSNLTECAAETTEKVGTYTVNGDKLEASFVMEGGVAEASTITAKPALNGIGAGAGAQT CCHHHHHHHHHHHHHHCCEEEECCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEE VAIHGERYTFFKNDDDAEKRLDIESDDNANDRSFAIEMPALEQEDEQNIQYNLVQISLQT EEEECCEEEEECCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC NDMGDDVDMYFDLPGKDLTCEEVSEFYNPTLTAIGLPKYGVSAQLMDNDSEEFNFCVAQF CCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEE TINETVPTGTIFSIIGQLKYDDDAGIVEPIKANIEWTGEADNE EECCCCCCCHHHHHHHCEEECCCCCCCCEEECCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA