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The map label for this gene is ppdD [C]

Identifier: 157962731

GI number: 157962731

Start: 3565008

End: 3565556

Strand: Direct

Name: ppdD [C]

Synonym: Spea_2913

Alternate gene names: 157962731

Gene position: 3565008-3565556 (Clockwise)

Preceding gene: 157962730

Following gene: 157962733

Centisome position: 68.89

GC content: 44.81

Gene sequence:

>549_bases
ATGAGGCAGAACACAAAAGGGTTTACATTAATTGAGTTGGTGGTTGTCATCATCATTTTAGGCATCCTTGCCATTGTTGC
TATTCCCAAATTTATTAACTTACAAAACGATGCCAGAATGTCTGCAATGGCAGGGCAGTTTGGGGCATTTAAAAGTGCCG
TAGGCCTTTACCATAGTGGTTGGGCCGCTGACGGAAATAGTGGCGCGATCGATAAGCTTGCTAGCTTTGGTGAGGGTAAC
GTGTCATCTAGCCCGACGGGGTACCCTTACTCTACATCTGGGGTTGATACTGAAGTCTTTACTGCATGCGAAGAGCTTTG
GCATGGGATTACCTCAACAGATTTTACTATCGCACACGTGACCGATGACGACTTAATGACTTCGGATGTCGACATAGCTT
ACACATACCGTGCCGACCAATGTATCTACCGTGATCTCTACTTTATTCAGCGCGGCGAAACAACAAGGGTAATGAACTAT
AACTTCAACACAGGTGAAATCACCATCAACGATGCTTTCTATAATTCAGATGGTAGTGTTCAGCCTTAG

Upstream 100 bases:

>100_bases
ACAGCAAAGAGCTATTATTAGGAATAGATCAAATAAAATGTAAGTTTAACAATGTAAACTTGCGCCCCAAATTCAAATTG
ACCATAGATAAAGAGTAGTA

Downstream 100 bases:

>100_bases
CAAGCACGAGATAAAGCCCTCCTTAGACAAAGGCGCTTTATCTCGAACATATCAGCTAAATAGTTACTCATAACCCCGCT
TCACTTCAGGGGTGATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRQNTKGFTLIELVVVIIILGILAIVAIPKFINLQNDARMSAMAGQFGAFKSAVGLYHSGWAADGNSGAIDKLASFGEGN
VSSSPTGYPYSTSGVDTEVFTACEELWHGITSTDFTIAHVTDDDLMTSDVDIAYTYRADQCIYRDLYFIQRGETTRVMNY
NFNTGEITINDAFYNSDGSVQP

Sequences:

>Translated_182_residues
MRQNTKGFTLIELVVVIIILGILAIVAIPKFINLQNDARMSAMAGQFGAFKSAVGLYHSGWAADGNSGAIDKLASFGEGN
VSSSPTGYPYSTSGVDTEVFTACEELWHGITSTDFTIAHVTDDDLMTSDVDIAYTYRADQCIYRDLYFIQRGETTRVMNY
NFNTGEITINDAFYNSDGSVQP
>Mature_182_residues
MRQNTKGFTLIELVVVIIILGILAIVAIPKFINLQNDARMSAMAGQFGAFKSAVGLYHSGWAADGNSGAIDKLASFGEGN
VSSSPTGYPYSTSGVDTEVFTACEELWHGITSTDFTIAHVTDDDLMTSDVDIAYTYRADQCIYRDLYFIQRGETTRVMNY
NFNTGEITINDAFYNSDGSVQP

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19886; Mature: 19886

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNTKGFTLIELVVVIIILGILAIVAIPKFINLQNDARMSAMAGQFGAFKSAVGLYHSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
WAADGNSGAIDKLASFGEGNVSSSPTGYPYSTSGVDTEVFTACEELWHGITSTDFTIAHV
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
TDDDLMTSDVDIAYTYRADQCIYRDLYFIQRGETTRVMNYNFNTGEITINDAFYNSDGSV
CCCCCEECCCCEEEEECCCHHHHHHHHEEECCCEEEEEEEECCCCEEEEECEEECCCCCC
QP
CC
>Mature Secondary Structure
MRQNTKGFTLIELVVVIIILGILAIVAIPKFINLQNDARMSAMAGQFGAFKSAVGLYHSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
WAADGNSGAIDKLASFGEGNVSSSPTGYPYSTSGVDTEVFTACEELWHGITSTDFTIAHV
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
TDDDLMTSDVDIAYTYRADQCIYRDLYFIQRGETTRVMNYNFNTGEITINDAFYNSDGSV
CCCCCEECCCCEEEEECCCHHHHHHHHEEECCCEEEEEEEECCCCEEEEECEEECCCCCC
QP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA