| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962708
Identifier: 157962708
GI number: 157962708
Start: 3529044
End: 3529388
Strand: Direct
Name: 157962708
Synonym: Spea_2889
Alternate gene names: NA
Gene position: 3529044-3529388 (Clockwise)
Preceding gene: 157962707
Following gene: 157962712
Centisome position: 68.2
GC content: 42.03
Gene sequence:
>345_bases ATGATTAAAACGTACGTTTTAGCAGGAGCCGCGCTAGCAATGTCATTTGGCGCTTCGGCAGCTATGTCATCTCAATTAGA AAACACACTAATCGCCGTTTGTAAGGCTGGAGCGAGTAACAGTGTTTTCCAATTTAATAGGACGATGAAAGATTATCGTA TCAATAAACGCAGAGTGTTTCCCCGCTTAGTCTGTAATGGTGAGAGTTTCTATAACTTCACGGTAAGTGCAGGGGCCGAC AAGACGGCTAAAAAAATTGCCCCATATAACCGAGGAACAGTGACGATTAAAGATATCGCGATGACAGAATATGATGCCGA GGTTTATGCAGTCAATTATGAATAA
Upstream 100 bases:
>100_bases GTTCAACATTTTGATACAACTCTCCCCCCCTTATTTAGGTGAACATAGGACATTAAGCTTTACTCAAGAGTGAACCCCAA TGAGAGTGAAGGAGCAAGAC
Downstream 100 bases:
>100_bases GTGATTTATGGCATGTAAAGCAGTAAAAGAGGCTGACGCCTCTTTTCTTTTGTCTAAAACTTATCAATTACATGGGCTAT GAAGGCTAGCTAGGGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE
Sequences:
>Translated_114_residues MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE >Mature_114_residues MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12530; Mature: 12530
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVF CCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEECCCHHHHCCCCCCCC PRLVCNGESFYNFTVSAGADKTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE EEEEECCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEEECCEEEEEECC >Mature Secondary Structure MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVF CCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEECCCHHHHCCCCCCCC PRLVCNGESFYNFTVSAGADKTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE EEEEECCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA