Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962708

Identifier: 157962708

GI number: 157962708

Start: 3529044

End: 3529388

Strand: Direct

Name: 157962708

Synonym: Spea_2889

Alternate gene names: NA

Gene position: 3529044-3529388 (Clockwise)

Preceding gene: 157962707

Following gene: 157962712

Centisome position: 68.2

GC content: 42.03

Gene sequence:

>345_bases
ATGATTAAAACGTACGTTTTAGCAGGAGCCGCGCTAGCAATGTCATTTGGCGCTTCGGCAGCTATGTCATCTCAATTAGA
AAACACACTAATCGCCGTTTGTAAGGCTGGAGCGAGTAACAGTGTTTTCCAATTTAATAGGACGATGAAAGATTATCGTA
TCAATAAACGCAGAGTGTTTCCCCGCTTAGTCTGTAATGGTGAGAGTTTCTATAACTTCACGGTAAGTGCAGGGGCCGAC
AAGACGGCTAAAAAAATTGCCCCATATAACCGAGGAACAGTGACGATTAAAGATATCGCGATGACAGAATATGATGCCGA
GGTTTATGCAGTCAATTATGAATAA

Upstream 100 bases:

>100_bases
GTTCAACATTTTGATACAACTCTCCCCCCCTTATTTAGGTGAACATAGGACATTAAGCTTTACTCAAGAGTGAACCCCAA
TGAGAGTGAAGGAGCAAGAC

Downstream 100 bases:

>100_bases
GTGATTTATGGCATGTAAAGCAGTAAAAGAGGCTGACGCCTCTTTTCTTTTGTCTAAAACTTATCAATTACATGGGCTAT
GAAGGCTAGCTAGGGCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD
KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE

Sequences:

>Translated_114_residues
MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD
KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE
>Mature_114_residues
MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVFPRLVCNGESFYNFTVSAGAD
KTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12530; Mature: 12530

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVF
CCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEECCCHHHHCCCCCCCC
PRLVCNGESFYNFTVSAGADKTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE
EEEEECCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEEECCEEEEEECC
>Mature Secondary Structure
MIKTYVLAGAALAMSFGASAAMSSQLENTLIAVCKAGASNSVFQFNRTMKDYRINKRRVF
CCEEEEEHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEECCCHHHHCCCCCCCC
PRLVCNGESFYNFTVSAGADKTAKKIAPYNRGTVTIKDIAMTEYDAEVYAVNYE
EEEEECCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA