| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962652
Identifier: 157962652
GI number: 157962652
Start: 3457764
End: 3458705
Strand: Direct
Name: 157962652
Synonym: Spea_2832
Alternate gene names: NA
Gene position: 3457764-3458705 (Clockwise)
Preceding gene: 157962651
Following gene: 157962653
Centisome position: 66.82
GC content: 46.39
Gene sequence:
>942_bases ATGCCAACTAACAACGGTTCTATTTACCCATTAGGCTTCAGATTACCCGCTCTATTTAGTAAAGCTGTTTTGACTTGCTG TATTTTATTCTCGCCCGCAAGCTACGCCAAGCAAGTGTGCAGCACTGATGCTATTGAAGCGATGGAAAATGACAGCGGTT ATTTTCAAGGATTCACCGCCGCGGTATGTAAGCAATTGCCCCACCAAGAACAATTCATCATGGGGGCATATCTACAATGG ACAGGCGGCAGCTTTGCAGGTGAAAGACATTACACCCTGCGCACCGTTATTATGGATACACAGGCTCATGAGGTTATCGC TCGTCATACAGGAAGTTTAACTGAGCGCTCAGGATTAACCATTACTCCGACCGCTCAAGCAGACAATGCAGATTCTGACA CTAAAAACCAAAGCAAGCCTGTACAAGCGCCGCTTTGGATTGATACTGCCAACTACAAACTTAACAGCGATACACGCGCA CTTGGTGTGCGTATGCTAGCCCAGCAGCACCCTGACGGGACGACGCATTATGAGTCAGACTACTTAAGTTTATTTGTCCA CCAAGGACGTTTTCTTATTCCTGTAGTTGAGAACCTACCGCTTTATTATTGGAAAGCCTGGCAAGACGAAGATAGTGCCA ACAATAATGTAAACAATAGCAATAAAGCTAGCGATGAGACCAGTATGGCACAGCGCTACATCGTGGAAACAGGTAAAGGC GCGTTGCATATTGAGCCGAAACAAAACAAAGGCTTTGCCGACTTAAAGCTACTAACCAAAACCAAGCTGTCTGGTGCCCT GCCCAAACTCACCGATAGCACTCAGAGCCGCACCACGATTACCCGTTTAAGGTTTAATGGTGAGCGTTATTACATTCTAG ATTCATCATTTGGCGATCACCGAGATTGGCAGAGTACTGAGCGTTGGTGGAAGCGTTGGTAG
Upstream 100 bases:
>100_bases CAAATAAACCAAACTGGGGTGAACTTTTTAACAGAGAGCAACAATAGCCATGAAGCCGCTTCGCAAACAGATCCAAACAG CAGTCAAGCGGAGAGCCAAT
Downstream 100 bases:
>100_bases GCCTCAGCGCGAGACAATTGCCTCAAGGCAACTGTCACAAGGCTATAAGGTTTGATTGTTTTCACTTGCTATAGCGGCGT ATGTCGTCAGCAAAGACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MPTNNGSIYPLGFRLPALFSKAVLTCCILFSPASYAKQVCSTDAIEAMENDSGYFQGFTAAVCKQLPHQEQFIMGAYLQW TGGSFAGERHYTLRTVIMDTQAHEVIARHTGSLTERSGLTITPTAQADNADSDTKNQSKPVQAPLWIDTANYKLNSDTRA LGVRMLAQQHPDGTTHYESDYLSLFVHQGRFLIPVVENLPLYYWKAWQDEDSANNNVNNSNKASDETSMAQRYIVETGKG ALHIEPKQNKGFADLKLLTKTKLSGALPKLTDSTQSRTTITRLRFNGERYYILDSSFGDHRDWQSTERWWKRW
Sequences:
>Translated_313_residues MPTNNGSIYPLGFRLPALFSKAVLTCCILFSPASYAKQVCSTDAIEAMENDSGYFQGFTAAVCKQLPHQEQFIMGAYLQW TGGSFAGERHYTLRTVIMDTQAHEVIARHTGSLTERSGLTITPTAQADNADSDTKNQSKPVQAPLWIDTANYKLNSDTRA LGVRMLAQQHPDGTTHYESDYLSLFVHQGRFLIPVVENLPLYYWKAWQDEDSANNNVNNSNKASDETSMAQRYIVETGKG ALHIEPKQNKGFADLKLLTKTKLSGALPKLTDSTQSRTTITRLRFNGERYYILDSSFGDHRDWQSTERWWKRW >Mature_312_residues PTNNGSIYPLGFRLPALFSKAVLTCCILFSPASYAKQVCSTDAIEAMENDSGYFQGFTAAVCKQLPHQEQFIMGAYLQWT GGSFAGERHYTLRTVIMDTQAHEVIARHTGSLTERSGLTITPTAQADNADSDTKNQSKPVQAPLWIDTANYKLNSDTRAL GVRMLAQQHPDGTTHYESDYLSLFVHQGRFLIPVVENLPLYYWKAWQDEDSANNNVNNSNKASDETSMAQRYIVETGKGA LHIEPKQNKGFADLKLLTKTKLSGALPKLTDSTQSRTTITRLRFNGERYYILDSSFGDHRDWQSTERWWKRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35335; Mature: 35204
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNNGSIYPLGFRLPALFSKAVLTCCILFSPASYAKQVCSTDAIEAMENDSGYFQGFTA CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHH AVCKQLPHQEQFIMGAYLQWTGGSFAGERHYTLRTVIMDTQAHEVIARHTGSLTERSGLT HHHHHCCCHHHHHEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCE ITPTAQADNADSDTKNQSKPVQAPLWIDTANYKLNSDTRALGVRMLAQQHPDGTTHYESD EEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCCCCH YLSLFVHQGRFLIPVVENLPLYYWKAWQDEDSANNNVNNSNKASDETSMAQRYIVETGKG HHEEHHHCCCEEEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC ALHIEPKQNKGFADLKLLTKTKLSGALPKLTDSTQSRTTITRLRFNGERYYILDSSFGDH EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCC RDWQSTERWWKRW CCHHHHHHHHHCC >Mature Secondary Structure PTNNGSIYPLGFRLPALFSKAVLTCCILFSPASYAKQVCSTDAIEAMENDSGYFQGFTA CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHH AVCKQLPHQEQFIMGAYLQWTGGSFAGERHYTLRTVIMDTQAHEVIARHTGSLTERSGLT HHHHHCCCHHHHHEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCE ITPTAQADNADSDTKNQSKPVQAPLWIDTANYKLNSDTRALGVRMLAQQHPDGTTHYESD EEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCCCCH YLSLFVHQGRFLIPVVENLPLYYWKAWQDEDSANNNVNNSNKASDETSMAQRYIVETGKG HHEEHHHCCCEEEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC ALHIEPKQNKGFADLKLLTKTKLSGALPKLTDSTQSRTTITRLRFNGERYYILDSSFGDH EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCC RDWQSTERWWKRW CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA