| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962651
Identifier: 157962651
GI number: 157962651
Start: 3456806
End: 3457774
Strand: Direct
Name: 157962651
Synonym: Spea_2831
Alternate gene names: NA
Gene position: 3456806-3457774 (Clockwise)
Preceding gene: 157962650
Following gene: 157962652
Centisome position: 66.8
GC content: 43.03
Gene sequence:
>969_bases ATGAAACTAATGATTAAACCATTGATAATATTTACAGCATTACAGTCAGTCATTGCTTTCAATGCCTATAGCTATGCTGA GGCTAGCCTTGAGCAAGAGAGCTATCAACAGAATAATCAACAACAAGATTGCAGCTTAAATCAGTTAAGCAGCGTACTCG ATTTTGATGCCGCACTGGTAACCAGAAAGTATGGTCTTAGCTTAGCCACAGACAATACGGTTTGTAGAGTATTACCCCAT AACAAAGAGCAAGCATTACTGTCTTATTTTCAATATTATCAATCTGACGAAGATGGCTTTTCAAGCAATCTATGGCGAGT ACTCTTGGTCAATCGCTACAGTAACAAAGTTGAAGCTAGCTATACTGGCGTGATCCAAGAAAGCAGCGCAATTAAAAGTC ACTCCGATAGTATTAGTATTGATAGCGCGAGTTATCGTCTCAATGACAATACGAGAGCACTTGGATTGGTATTAGATCTT GCTAATTACGACACATCGCCGCAAGAGCATGAGTACCGCGCCTTCAAAACCAATCGTTTTCTTAGCCTATTTGTTCAAGA GGGAGACAAGCTACGCCCAGTGCTTAAACACCTGCCGCTGGATTACGAGCTAGAAGGCACTGATACGGCAGGCAGTAATG GTGGGGGTTACCTGCATTATGGCGTACAGGGTAGAGTTGAAGTGTTATCCAGCACCAGCCATGGCTACCATGATTTAAAA TTGGTGACTCAAGGGCAACAATACAGTACAGACGGTGAATATGATCAAACCGAAGAGATAAGCTTTAGCACTGAGCTTAA CTATAGCGGCAGCCGCTACCCAGTGATCACCGAACAATTACCCGCAGCTGAATTTTGGCAAATAAACCAAACTGGGGTGA ACTTTTTAACAGAGAGCAACAATAGCCATGAAGCCGCTTCGCAAACAGATCCAAACAGCAGTCAAGCGGAGAGCCAATAT GCCAACTAA
Upstream 100 bases:
>100_bases CAATCCCGCTTCGTAATGGCGTACAAGTTCGCGGCTATAAAACCGCTGTTTATCGCGCCCTCCCTAACTAATTAATTAAT TAAATGGCTAAAACATACTG
Downstream 100 bases:
>100_bases CAACGGTTCTATTTACCCATTAGGCTTCAGATTACCCGCTCTATTTAGTAAAGCTGTTTTGACTTGCTGTATTTTATTCT CGCCCGCAAGCTACGCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKLMIKPLIIFTALQSVIAFNAYSYAEASLEQESYQQNNQQQDCSLNQLSSVLDFDAALVTRKYGLSLATDNTVCRVLPH NKEQALLSYFQYYQSDEDGFSSNLWRVLLVNRYSNKVEASYTGVIQESSAIKSHSDSISIDSASYRLNDNTRALGLVLDL ANYDTSPQEHEYRAFKTNRFLSLFVQEGDKLRPVLKHLPLDYELEGTDTAGSNGGGYLHYGVQGRVEVLSSTSHGYHDLK LVTQGQQYSTDGEYDQTEEISFSTELNYSGSRYPVITEQLPAAEFWQINQTGVNFLTESNNSHEAASQTDPNSSQAESQY AN
Sequences:
>Translated_322_residues MKLMIKPLIIFTALQSVIAFNAYSYAEASLEQESYQQNNQQQDCSLNQLSSVLDFDAALVTRKYGLSLATDNTVCRVLPH NKEQALLSYFQYYQSDEDGFSSNLWRVLLVNRYSNKVEASYTGVIQESSAIKSHSDSISIDSASYRLNDNTRALGLVLDL ANYDTSPQEHEYRAFKTNRFLSLFVQEGDKLRPVLKHLPLDYELEGTDTAGSNGGGYLHYGVQGRVEVLSSTSHGYHDLK LVTQGQQYSTDGEYDQTEEISFSTELNYSGSRYPVITEQLPAAEFWQINQTGVNFLTESNNSHEAASQTDPNSSQAESQY AN >Mature_322_residues MKLMIKPLIIFTALQSVIAFNAYSYAEASLEQESYQQNNQQQDCSLNQLSSVLDFDAALVTRKYGLSLATDNTVCRVLPH NKEQALLSYFQYYQSDEDGFSSNLWRVLLVNRYSNKVEASYTGVIQESSAIKSHSDSISIDSASYRLNDNTRALGLVLDL ANYDTSPQEHEYRAFKTNRFLSLFVQEGDKLRPVLKHLPLDYELEGTDTAGSNGGGYLHYGVQGRVEVLSSTSHGYHDLK LVTQGQQYSTDGEYDQTEEISFSTELNYSGSRYPVITEQLPAAEFWQINQTGVNFLTESNNSHEAASQTDPNSSQAESQY AN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36131; Mature: 36131
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMIKPLIIFTALQSVIAFNAYSYAEASLEQESYQQNNQQQDCSLNQLSSVLDFDAALV CCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TRKYGLSLATDNTVCRVLPHNKEQALLSYFQYYQSDEDGFSSNLWRVLLVNRYSNKVEAS HHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHCCEEEEEEECCCCCCCCC YTGVIQESSAIKSHSDSISIDSASYRLNDNTRALGLVLDLANYDTSPQEHEYRAFKTNRF EEEEEECCHHHHCCCCCEEECCCEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH LSLFVQEGDKLRPVLKHLPLDYELEGTDTAGSNGGGYLHYGVQGRVEVLSSTSHGYHDLK EEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEE LVTQGQQYSTDGEYDQTEEISFSTELNYSGSRYPVITEQLPAAEFWQINQTGVNFLTESN EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHEECCCCCCEEEECCC NSHEAASQTDPNSSQAESQYAN CCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKLMIKPLIIFTALQSVIAFNAYSYAEASLEQESYQQNNQQQDCSLNQLSSVLDFDAALV CCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TRKYGLSLATDNTVCRVLPHNKEQALLSYFQYYQSDEDGFSSNLWRVLLVNRYSNKVEAS HHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHCCEEEEEEECCCCCCCCC YTGVIQESSAIKSHSDSISIDSASYRLNDNTRALGLVLDLANYDTSPQEHEYRAFKTNRF EEEEEECCHHHHCCCCCEEECCCEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH LSLFVQEGDKLRPVLKHLPLDYELEGTDTAGSNGGGYLHYGVQGRVEVLSSTSHGYHDLK EEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEE LVTQGQQYSTDGEYDQTEEISFSTELNYSGSRYPVITEQLPAAEFWQINQTGVNFLTESN EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHEECCCCCCEEEECCC NSHEAASQTDPNSSQAESQYAN CCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA