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The map label for this gene is 157962607

Identifier: 157962607

GI number: 157962607

Start: 3403713

End: 3404486

Strand: Direct

Name: 157962607

Synonym: Spea_2786

Alternate gene names: NA

Gene position: 3403713-3404486 (Clockwise)

Preceding gene: 157962594

Following gene: 157962614

Centisome position: 65.78

GC content: 46.51

Gene sequence:

>774_bases
ATGACACAAGCAACTGCAATAATTGTGGGCGCTAGCTCATTACTTAGCCGTGAAATTGCAAAACAACTTGCAGATGAAGG
CGTTGAACTGGCCCTATTAGCACAAGATCCACAATCTCTTATCGAGTTTAGCCAATCCTTGCCCACTAAGGTGCAGGTGT
TTCCGCTGCAAATCGACGAGCCCGATGCCATCATCAGTACCATGAATGCCGTTTGGCTATCTCTTGGTGGCGCTCATCTG
GTTTTGGTCAATACAGGTCTCACTCACTATGACCCTGAACTACCTTGGCAGCCAGAGCAAGATATCATCACAGTTAATGT
GCAAGGCTTCTCGGCCATTTGCAATACAGCATTTAGACTATTTCGCGATCAAGGCTATGGTCAATTAGCTGCGATTAACT
CGATTGCGGGATTAAGAGGCGGCCCTAGTGTGGCTTATCACGCCTCTAAAGCTTATGCACAAAACTATTTCGAAGGTTTA
AGCATGCACGCCCAGCGCTTAAAGATGCCTATTACCATTACCGATATCCAATTAGGTATGCTAGATAAGGCAGCCATGCA
GCAAAACAGGCTATGGTTATCACCACTGCCCGTAGTTGCCAGCCAAATAATTAAGGCGATGAAAACCGGTAAGCGCAAAG
CCTATGTAACCAAACGCTGGCGTCTCGTCGCTTGGTTAACCAAAGGCTTACCAGAGTTTGTTTACAATACTCGCCACTGG
AAAACCAAAGCGCAGAAGAAAGCTGAACGCGCGGCTAAGAAAGAATCGAAGTAA

Upstream 100 bases:

>100_bases
ATGCATTCTCACTATCCGTATCACAGCAACAGACAATTAATCTTGTTCTAATACACTTATCTTTCTATGATAAGTTACCT
ATTCGAAGTCGAATACCCAT

Downstream 100 bases:

>100_bases
TCACAGCAATTGTGTATGAAACATAAAAAAGGAGCCTATTGGCTCCTTTTTTATGGGTGGGACTTGTCCAGAATGTCTTC
AGATTAGAAGGTGTAACCTA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTQATAIIVGASSLLSREIAKQLADEGVELALLAQDPQSLIEFSQSLPTKVQVFPLQIDEPDAIISTMNAVWLSLGGAHL
VLVNTGLTHYDPELPWQPEQDIITVNVQGFSAICNTAFRLFRDQGYGQLAAINSIAGLRGGPSVAYHASKAYAQNYFEGL
SMHAQRLKMPITITDIQLGMLDKAAMQQNRLWLSPLPVVASQIIKAMKTGKRKAYVTKRWRLVAWLTKGLPEFVYNTRHW
KTKAQKKAERAAKKESK

Sequences:

>Translated_257_residues
MTQATAIIVGASSLLSREIAKQLADEGVELALLAQDPQSLIEFSQSLPTKVQVFPLQIDEPDAIISTMNAVWLSLGGAHL
VLVNTGLTHYDPELPWQPEQDIITVNVQGFSAICNTAFRLFRDQGYGQLAAINSIAGLRGGPSVAYHASKAYAQNYFEGL
SMHAQRLKMPITITDIQLGMLDKAAMQQNRLWLSPLPVVASQIIKAMKTGKRKAYVTKRWRLVAWLTKGLPEFVYNTRHW
KTKAQKKAERAAKKESK
>Mature_256_residues
TQATAIIVGASSLLSREIAKQLADEGVELALLAQDPQSLIEFSQSLPTKVQVFPLQIDEPDAIISTMNAVWLSLGGAHLV
LVNTGLTHYDPELPWQPEQDIITVNVQGFSAICNTAFRLFRDQGYGQLAAINSIAGLRGGPSVAYHASKAYAQNYFEGLS
MHAQRLKMPITITDIQLGMLDKAAMQQNRLWLSPLPVVASQIIKAMKTGKRKAYVTKRWRLVAWLTKGLPEFVYNTRHWK
TKAQKKAERAAKKESK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 28486; Mature: 28355

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATAIIVGASSLLSREIAKQLADEGVELALLAQDPQSLIEFSQSLPTKVQVFPLQIDE
CCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEEECC
PDAIISTMNAVWLSLGGAHLVLVNTGLTHYDPELPWQPEQDIITVNVQGFSAICNTAFRL
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH
FRDQGYGQLAAINSIAGLRGGPSVAYHASKAYAQNYFEGLSMHAQRLKMPITITDIQLGM
HHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHH
LDKAAMQQNRLWLSPLPVVASQIIKAMKTGKRKAYVTKRWRLVAWLTKGLPEFVYNTRHW
HHHHHHHHCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
KTKAQKKAERAAKKESK
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQATAIIVGASSLLSREIAKQLADEGVELALLAQDPQSLIEFSQSLPTKVQVFPLQIDE
CCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEEECC
PDAIISTMNAVWLSLGGAHLVLVNTGLTHYDPELPWQPEQDIITVNVQGFSAICNTAFRL
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH
FRDQGYGQLAAINSIAGLRGGPSVAYHASKAYAQNYFEGLSMHAQRLKMPITITDIQLGM
HHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHH
LDKAAMQQNRLWLSPLPVVASQIIKAMKTGKRKAYVTKRWRLVAWLTKGLPEFVYNTRHW
HHHHHHHHCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
KTKAQKKAERAAKKESK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]