| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962539
Identifier: 157962539
GI number: 157962539
Start: 3323498
End: 3323869
Strand: Direct
Name: 157962539
Synonym: Spea_2718
Alternate gene names: NA
Gene position: 3323498-3323869 (Clockwise)
Preceding gene: 157962536
Following gene: 157962542
Centisome position: 64.23
GC content: 37.9
Gene sequence:
>372_bases ATGACCAACCTAAACAATGGATTAAACAATGAGCTAATGCTTGAGTTAACAAGCCTTGGCTATCAGGTGGAAGAGCAAGG TAATAAGCTTAAAGTAAAGCTTGGAGGATTAGCCTATCCCATCTATATAGACTACGACTTGTGTAAAAATCAATTCATTG TAAACACACGCGATATCATTAACTCTACCTTTTCAATTGCGTGGTTGTTTTTTGCACTCAACAATACTGGCTGGAAACTA GCGCTATTACTCTGCATCATGGTCATTGGTTTGTTAAACATAGTCCTTACCGAAATCAAGTCACAGCCATTAAAGCAACG TGTCTGCTTATTTAATAGAGACTCCTGCTATCAAAACAAGCACTCTAACTGA
Upstream 100 bases:
>100_bases CTTCGATTGAAAATGGCTAAATTTAACACGCATGATTAACTATATGCCAACAATCGCTAAAGGCGAACGCTAGAAAGATA AAATGGAGAAAGACGCAAGG
Downstream 100 bases:
>100_bases TTGATTAACGCTATGAAGAGCCAAGCGTTCTAGGGGATTACCAGTTTCAGTTATTGGCTATCGACTATCCAGCGCAGGAA AAACTGTGTAGAAAAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTNLNNGLNNELMLELTSLGYQVEEQGNKLKVKLGGLAYPIYIDYDLCKNQFIVNTRDIINSTFSIAWLFFALNNTGWKL ALLLCIMVIGLLNIVLTEIKSQPLKQRVCLFNRDSCYQNKHSN
Sequences:
>Translated_123_residues MTNLNNGLNNELMLELTSLGYQVEEQGNKLKVKLGGLAYPIYIDYDLCKNQFIVNTRDIINSTFSIAWLFFALNNTGWKL ALLLCIMVIGLLNIVLTEIKSQPLKQRVCLFNRDSCYQNKHSN >Mature_122_residues TNLNNGLNNELMLELTSLGYQVEEQGNKLKVKLGGLAYPIYIDYDLCKNQFIVNTRDIINSTFSIAWLFFALNNTGWKLA LLLCIMVIGLLNIVLTEIKSQPLKQRVCLFNRDSCYQNKHSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14076; Mature: 13944
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLNNGLNNELMLELTSLGYQVEEQGNKLKVKLGGLAYPIYIDYDLCKNQFIVNTRDII CCCCCCCCCCHHEEEHHHCCEEEECCCCEEEEEECCEEEEEEEEHHHCCCEEEECHHHHH NSTFSIAWLFFALNNTGWKLALLLCIMVIGLLNIVLTEIKSQPLKQRVCLFNRDSCYQNK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC HSN CCC >Mature Secondary Structure TNLNNGLNNELMLELTSLGYQVEEQGNKLKVKLGGLAYPIYIDYDLCKNQFIVNTRDII CCCCCCCCCHHEEEHHHCCEEEECCCCEEEEEECCEEEEEEEEHHHCCCEEEECHHHHH NSTFSIAWLFFALNNTGWKLALLLCIMVIGLLNIVLTEIKSQPLKQRVCLFNRDSCYQNK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC HSN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA