Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yagX [C]
Identifier: 157962529
GI number: 157962529
Start: 3306603
End: 3309536
Strand: Reverse
Name: yagX [C]
Synonym: Spea_2708
Alternate gene names: 157962529
Gene position: 3309536-3306603 (Counterclockwise)
Preceding gene: 157962530
Following gene: 157962528
Centisome position: 63.96
GC content: 45.47
Gene sequence:
>2934_bases ATGAGATACAACAAACTAGCCCTTTCAATCCTATTTGGTCTGTCTTGTACCCTTAACCCTCAGCTGTCTTTACCTAGCTA TGCATCGGTAAAAACGGAAGGCATTGCGATACCAGATGAGTTTGCAGAGCTGTATTCAGGCAGTACTGAGCAGTTTAGCT TTCAGTTGGCCAGTAGCAATGATCAGCTTGTTATCAAGCTTAACTCTACGCCTACCTCAGCATCTTTAAATAGGGCGAGT AAGGCCAAGGTTGAGCAATACTTAACGGCGCATAATGTTAAGCCTCAAGCTGCTAGCGACATTGTCGCGGCGATGCAACA CATTAGCACATCAAGCTTGTGCCAGGGGAAAGTGTCTGAGTGCAGCTTGATGCCAGAGCGTTACGCCTTTACCTATGATT TTGAGCATAAGAAACTCAGCCTATTTATTAATGCGGATCTGATTGATAACCGCAACACCAGTCGTCGTTTTCATGATGCA ACTAACGAGCAGTATGGTGTCATCAACAGTGTTAATTTGAACTATCACTATTTTAGTGATGGTGGCTCATCGGTTATCGG CCGTGATGAGACCTTAATTGGTTTAAAGTATGGCTCGATTAAATCAAGCCTCTATGCCGATTCTGCTGCGAATAAGTTTG ATGCAGAGCAGCTATCTTACGACTATGAAGCGCAAAACAGACGCGTTCAATTCGGCCACTTCAAATACGGTTATGAGCAG AATACGACGGCGTTTATGGACTTATCGGGAAGCTATTCACAAGACATAGTCAACTATTCTTCTTCGCAGAACTTGATTGA GGGGGGCAAGCAAAATAATCGTCGCCTGTTCTATATCTTGCCGAACAAGGGGCGCATCGAGGTCTACCGCGATAGTCATT TGATCTACAGCAAGAATGTGGACTCAGGCCAGCAGAGCATCGCCTTTCGCGATCTGCCCTATGGCTCTTATACGGCAACT GTGGTGGTGATTGCTGCGGGGCGTGAGATCTTAAAAGAGCGTCAGCAGATTGTTAATAACAGTGCTTTTTCACTCAATAA AGGTGAATACGACTATAGCTTCTCTGCTGGTCGCTTTAACGACCGCTATGAAGACAGTTATGAAGGCGTTGTAGAGCAAA ATAGGCAGCGGCAGCTCATTAAGCTGCAAGCTAAGTTAGGTTACCGAGTTAACTCTGATAGCTTGCAAGCTGATGCGGTA AATTTATCAGCGCAAGCTATCGCGTTAGATGCTTATCTAGAAGCGTTGCCTGAACAGTCCAAACTGCAACTCGATAGCAA TAACTTTGTCGAGGGTAAGTTTTCTTATCAGCTAACCGATAGCACCATGGTTGGCGCAAGGCTGCTGTCTAACTCTGATA GCACTTTGTCTGAATTAGGCATTAAGACCTCGTTTAATGATGCGTCGACCGCACAGTTCAAATATGCATCTTTCTCAAAC GGTAGTCAGTTTATGGCTGCCGATGTGAGTTTTTACAGCATAGGGGTGGGCTACGAGAAGTTCGATTCAGCCGACAGTGA CTTTGGTTTAGATAACTTTATGCTGTCAAATACCGGTTATCAGCGTCTTAATGTCAATCTTTCCTCGGATCTTTGGGGCG GTCAAGGCTACCTGCTGTATGTGAACAACAAGCTAGATGCGACCAATTCGCCAGCATTATTCGTCGACCAAAGTGATTAT TGGTCTGTGAGTGCCGGGTTTTCCCACTCGTTTATAGCGGACTCTGTCATTAACTTTTCTGCGACATTTCAAGGCGGTGA CAGTTTTGGTGTTGAAGATGATTGGTATGCGGGCGTGCTTTGGTCGGTCCCTCTATCGGCTGGCTGGAGTGCGAGCTCGT CGGTATCGGTGAGTCGACAAGGGCTCGATGAGTTTAGAAACAGCGTGGCAAATGACAGACAGGTGACTCGCAACTTATCA ATGAATAATGAGCTTGGGATCAGCTATAACGGCACCGATGTTGACCGTAATATGAGCAGCGACCTGTCCAGTAATATTAG TTATGACAACAGCTACGTGGCGTCAGATACCTATGCATATATTAGCTCAGACGGCACTCATTCTGTCAGTTCAAGCTTTA ATAGCACTCAGGTGTTATCGGCTAAAGGCGAAGCTTACTTCACCTCAGAGCAGAGTGACTCCTACATCATCGTCGACGCC CAAAATCAGGGGGGAGATGACGCTCACCGTGGTTTGCTTTCTATCTATGATGATAACACGCTGAGTTATAGCGAGAATAT TGACCGAGAAGAGACGATCATTGCGGTCGATAAATACAAGGCATTTAATGCGCGCTTAGACACTGACTCATCAAATTATA TTAGCGATCAAACACGGGATATTTCCGGTTATAGCCTACCCGGGACTGTGATGGCTCTCGATATTGACTTGGTGAAAGTC AAAACCTTTATCTCGTCATTTGACGACGTTAATCATCGAGTGATTGCAAACGTTCAGTGCACTGGCGAGGGCTGTATCGA CGTTGAGCAGGTCGAGGAGGGGGTATTTAAAATTTCCGTTATTGCTGGCTCTGATTATCAATTGGTATCAGATAATCAAA CTTGTGTGACCCCGAGCTTGGATAGGGATTCGACCTATATCGTCAATACCGGTAATAACTATTGCCTGCCGGGATTAGAT AACGACGAAACATTGATGCTGGCACAAGATAACGCCTTGCAGCCTATCAAGATAGATGGCGAGCAATATTACTTTATTGG CATGTTCACCAATGAGGAAGAACGACTTAATACCGGCCTTAAACTGCAGCAGGCAGGCTTGTCGGTGATTACTCGCAGCG TGGGTTCGCGCCAATATGTCTATGTCGTTAATGGGTCAAGCCTTAGCGCAATGCAAGTATCGCTGCTAAACGAATTAAGC CTTTATGCGAAGAGTCTCATTAAAGATGACAGCTTTGCTAACAACTGGAACTAA
Upstream 100 bases:
>100_bases GAAAGTACAGCAACTTTGACGTTGAACTTAAGTTTGCGCCAGTCAGCGTAAAAGATGACTACTGCGAGGGTATGATCAAG ATGAGCATAGAGTTAGCCAT
Downstream 100 bases:
>100_bases CTTATGAAGATGAATAAACCACTATTATTGATTGCACTCTCTGCATTTGTGTTCGATGCGTCGGCAATGGCAATTAGCAG TTTAATGCTTACTAACCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 977; Mature: 977
Protein sequence:
>977_residues MRYNKLALSILFGLSCTLNPQLSLPSYASVKTEGIAIPDEFAELYSGSTEQFSFQLASSNDQLVIKLNSTPTSASLNRAS KAKVEQYLTAHNVKPQAASDIVAAMQHISTSSLCQGKVSECSLMPERYAFTYDFEHKKLSLFINADLIDNRNTSRRFHDA TNEQYGVINSVNLNYHYFSDGGSSVIGRDETLIGLKYGSIKSSLYADSAANKFDAEQLSYDYEAQNRRVQFGHFKYGYEQ NTTAFMDLSGSYSQDIVNYSSSQNLIEGGKQNNRRLFYILPNKGRIEVYRDSHLIYSKNVDSGQQSIAFRDLPYGSYTAT VVVIAAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYEDSYEGVVEQNRQRQLIKLQAKLGYRVNSDSLQADAV NLSAQAIALDAYLEALPEQSKLQLDSNNFVEGKFSYQLTDSTMVGARLLSNSDSTLSELGIKTSFNDASTAQFKYASFSN GSQFMAADVSFYSIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYLLYVNNKLDATNSPALFVDQSDY WSVSAGFSHSFIADSVINFSATFQGGDSFGVEDDWYAGVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQVTRNLS MNNELGISYNGTDVDRNMSSDLSSNISYDNSYVASDTYAYISSDGTHSVSSSFNSTQVLSAKGEAYFTSEQSDSYIIVDA QNQGGDDAHRGLLSIYDDNTLSYSENIDREETIIAVDKYKAFNARLDTDSSNYISDQTRDISGYSLPGTVMALDIDLVKV KTFISSFDDVNHRVIANVQCTGEGCIDVEQVEEGVFKISVIAGSDYQLVSDNQTCVTPSLDRDSTYIVNTGNNYCLPGLD NDETLMLAQDNALQPIKIDGEQYYFIGMFTNEEERLNTGLKLQQAGLSVITRSVGSRQYVYVVNGSSLSAMQVSLLNELS LYAKSLIKDDSFANNWN
Sequences:
>Translated_977_residues MRYNKLALSILFGLSCTLNPQLSLPSYASVKTEGIAIPDEFAELYSGSTEQFSFQLASSNDQLVIKLNSTPTSASLNRAS KAKVEQYLTAHNVKPQAASDIVAAMQHISTSSLCQGKVSECSLMPERYAFTYDFEHKKLSLFINADLIDNRNTSRRFHDA TNEQYGVINSVNLNYHYFSDGGSSVIGRDETLIGLKYGSIKSSLYADSAANKFDAEQLSYDYEAQNRRVQFGHFKYGYEQ NTTAFMDLSGSYSQDIVNYSSSQNLIEGGKQNNRRLFYILPNKGRIEVYRDSHLIYSKNVDSGQQSIAFRDLPYGSYTAT VVVIAAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYEDSYEGVVEQNRQRQLIKLQAKLGYRVNSDSLQADAV NLSAQAIALDAYLEALPEQSKLQLDSNNFVEGKFSYQLTDSTMVGARLLSNSDSTLSELGIKTSFNDASTAQFKYASFSN GSQFMAADVSFYSIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYLLYVNNKLDATNSPALFVDQSDY WSVSAGFSHSFIADSVINFSATFQGGDSFGVEDDWYAGVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQVTRNLS MNNELGISYNGTDVDRNMSSDLSSNISYDNSYVASDTYAYISSDGTHSVSSSFNSTQVLSAKGEAYFTSEQSDSYIIVDA QNQGGDDAHRGLLSIYDDNTLSYSENIDREETIIAVDKYKAFNARLDTDSSNYISDQTRDISGYSLPGTVMALDIDLVKV KTFISSFDDVNHRVIANVQCTGEGCIDVEQVEEGVFKISVIAGSDYQLVSDNQTCVTPSLDRDSTYIVNTGNNYCLPGLD NDETLMLAQDNALQPIKIDGEQYYFIGMFTNEEERLNTGLKLQQAGLSVITRSVGSRQYVYVVNGSSLSAMQVSLLNELS LYAKSLIKDDSFANNWN >Mature_977_residues MRYNKLALSILFGLSCTLNPQLSLPSYASVKTEGIAIPDEFAELYSGSTEQFSFQLASSNDQLVIKLNSTPTSASLNRAS KAKVEQYLTAHNVKPQAASDIVAAMQHISTSSLCQGKVSECSLMPERYAFTYDFEHKKLSLFINADLIDNRNTSRRFHDA TNEQYGVINSVNLNYHYFSDGGSSVIGRDETLIGLKYGSIKSSLYADSAANKFDAEQLSYDYEAQNRRVQFGHFKYGYEQ NTTAFMDLSGSYSQDIVNYSSSQNLIEGGKQNNRRLFYILPNKGRIEVYRDSHLIYSKNVDSGQQSIAFRDLPYGSYTAT VVVIAAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYEDSYEGVVEQNRQRQLIKLQAKLGYRVNSDSLQADAV NLSAQAIALDAYLEALPEQSKLQLDSNNFVEGKFSYQLTDSTMVGARLLSNSDSTLSELGIKTSFNDASTAQFKYASFSN GSQFMAADVSFYSIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYLLYVNNKLDATNSPALFVDQSDY WSVSAGFSHSFIADSVINFSATFQGGDSFGVEDDWYAGVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQVTRNLS MNNELGISYNGTDVDRNMSSDLSSNISYDNSYVASDTYAYISSDGTHSVSSSFNSTQVLSAKGEAYFTSEQSDSYIIVDA QNQGGDDAHRGLLSIYDDNTLSYSENIDREETIIAVDKYKAFNARLDTDSSNYISDQTRDISGYSLPGTVMALDIDLVKV KTFISSFDDVNHRVIANVQCTGEGCIDVEQVEEGVFKISVIAGSDYQLVSDNQTCVTPSLDRDSTYIVNTGNNYCLPGLD NDETLMLAQDNALQPIKIDGEQYYFIGMFTNEEERLNTGLKLQQAGLSVITRSVGSRQYVYVVNGSSLSAMQVSLLNELS LYAKSLIKDDSFANNWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108097; Mature: 108097
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYNKLALSILFGLSCTLNPQLSLPSYASVKTEGIAIPDEFAELYSGSTEQFSFQLASSN CCCHHEEEEEHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCC DQLVIKLNSTPTSASLNRASKAKVEQYLTAHNVKPQAASDIVAAMQHISTSSLCQGKVSE CEEEEEECCCCCCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCHH CSLMPERYAFTYDFEHKKLSLFINADLIDNRNTSRRFHDATNEQYGVINSVNLNYHYFSD HHCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECC GGSSVIGRDETLIGLKYGSIKSSLYADSAANKFDAEQLSYDYEAQNRRVQFGHFKYGYEQ CCCEECCCCCEEEEEEECCHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCC NTTAFMDLSGSYSQDIVNYSSSQNLIEGGKQNNRRLFYILPNKGRIEVYRDSHLIYSKNV CCEEEEECCCCCHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEECCC DSGQQSIAFRDLPYGSYTATVVVIAAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFN CCCCCCEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCC DRYEDSYEGVVEQNRQRQLIKLQAKLGYRVNSDSLQADAVNLSAQAIALDAYLEALPEQS CCCCCHHHHHHHHCHHHHHEEEEEHHCEEECCCCCEEEEEECCHHEEHHHHHHHHCCCCC KLQLDSNNFVEGKFSYQLTDSTMVGARLLSNSDSTLSELGIKTSFNDASTAQFKYASFSN EEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEECCCCCCCCEEEEEECCC GSQFMAADVSFYSIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYLLY CCEEEEEEEEEEEEECCHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEE VNNKLDATNSPALFVDQSDYWSVSAGFSHSFIADSVINFSATFQGGDSFGVEDDWYAGVL ECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHEEEEEEECCCCCCCCCCCCEEEEE WSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQVTRNLSMNNELGISYNGTDVDRNMSS EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCCCHH DLSSNISYDNSYVASDTYAYISSDGTHSVSSSFNSTQVLSAKGEAYFTSEQSDSYIIVDA HHHCCCCCCCCEEECCEEEEEECCCCCHHHCCCCCEEEEEECCCEEEECCCCCCEEEEEC QNQGGDDAHRGLLSIYDDNTLSYSENIDREETIIAVDKYKAFNARLDTDSSNYISDQTRD CCCCCCHHHCCEEEEECCCEEECCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCCCCC ISGYSLPGTVMALDIDLVKVKTFISSFDDVNHRVIANVQCTGEGCIDVEQVEEGVFKISV CCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHCCCEEEEEE IAGSDYQLVSDNQTCVTPSLDRDSTYIVNTGNNYCLPGLDNDETLMLAQDNALQPIKIDG EECCCEEEECCCCEEECCCCCCCCEEEEECCCCEECCCCCCCCEEEEECCCCCCCEEECC EQYYFIGMFTNEEERLNTGLKLQQAGLSVITRSVGSRQYVYVVNGSSLSAMQVSLLNELS CEEEEEEEEECCHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH LYAKSLIKDDSFANNWN HHHHHHHCCCCCCCCCC >Mature Secondary Structure MRYNKLALSILFGLSCTLNPQLSLPSYASVKTEGIAIPDEFAELYSGSTEQFSFQLASSN CCCHHEEEEEHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCC DQLVIKLNSTPTSASLNRASKAKVEQYLTAHNVKPQAASDIVAAMQHISTSSLCQGKVSE CEEEEEECCCCCCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCHH CSLMPERYAFTYDFEHKKLSLFINADLIDNRNTSRRFHDATNEQYGVINSVNLNYHYFSD HHCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECC GGSSVIGRDETLIGLKYGSIKSSLYADSAANKFDAEQLSYDYEAQNRRVQFGHFKYGYEQ CCCEECCCCCEEEEEEECCHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCC NTTAFMDLSGSYSQDIVNYSSSQNLIEGGKQNNRRLFYILPNKGRIEVYRDSHLIYSKNV CCEEEEECCCCCHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEECCC DSGQQSIAFRDLPYGSYTATVVVIAAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFN CCCCCCEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCC DRYEDSYEGVVEQNRQRQLIKLQAKLGYRVNSDSLQADAVNLSAQAIALDAYLEALPEQS CCCCCHHHHHHHHCHHHHHEEEEEHHCEEECCCCCEEEEEECCHHEEHHHHHHHHCCCCC KLQLDSNNFVEGKFSYQLTDSTMVGARLLSNSDSTLSELGIKTSFNDASTAQFKYASFSN EEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEECCCCCCCCEEEEEECCC GSQFMAADVSFYSIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYLLY CCEEEEEEEEEEEEECCHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEE VNNKLDATNSPALFVDQSDYWSVSAGFSHSFIADSVINFSATFQGGDSFGVEDDWYAGVL ECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHEEEEEEECCCCCCCCCCCCEEEEE WSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQVTRNLSMNNELGISYNGTDVDRNMSS EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCCCHH DLSSNISYDNSYVASDTYAYISSDGTHSVSSSFNSTQVLSAKGEAYFTSEQSDSYIIVDA HHHCCCCCCCCEEECCEEEEEECCCCCHHHCCCCCEEEEEECCCEEEECCCCCCEEEEEC QNQGGDDAHRGLLSIYDDNTLSYSENIDREETIIAVDKYKAFNARLDTDSSNYISDQTRD CCCCCCHHHCCEEEEECCCEEECCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCCCCC ISGYSLPGTVMALDIDLVKVKTFISSFDDVNHRVIANVQCTGEGCIDVEQVEEGVFKISV CCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHCCCEEEEEE IAGSDYQLVSDNQTCVTPSLDRDSTYIVNTGNNYCLPGLDNDETLMLAQDNALQPIKIDG EECCCEEEECCCCEEECCCCCCCCEEEEECCCCEECCCCCCCCEEEEECCCCCCCEEECC EQYYFIGMFTNEEERLNTGLKLQQAGLSVITRSVGSRQYVYVVNGSSLSAMQVSLLNELS CEEEEEEEEECCHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH LYAKSLIKDDSFANNWN HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA