Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962527
Identifier: 157962527
GI number: 157962527
Start: 3304763
End: 3305872
Strand: Reverse
Name: 157962527
Synonym: Spea_2706
Alternate gene names: NA
Gene position: 3305872-3304763 (Counterclockwise)
Preceding gene: 157962528
Following gene: 157962526
Centisome position: 63.89
GC content: 46.31
Gene sequence:
>1110_bases ATGTGCTTCGCAGTAATCAAGCTGGCTTGCAAGGCAGGTTTTGGGGCGGTGTTGACGCCGTTCGCACATTTTTCATCGAT TTCACTATGCCTATTGCTTGGTGCATCTCTACCAGTGAGTGCATTTACCATCAATGGCACCTTAACGGGCGATAAACTAG AGTGGGCCAATGCCAGTAGCGATGGCGCGTATATCAGGCCAAACTACTGGTTTACCCCAACTCGATTGCCTGAAACGACT ATGTGGGTGCCGGGGACATACACTAGCCCAACCCAGATGAATATTGAGTTATCCAGCGGGGCAGAGCATGTGTCGATGCC AATTAAGTTAACCGGAGTTAAATATCAGCTCGGTGGCCAGTTTTCACAAAGCCCTTATGCCGATATCTATCCAGCTTGTG AGCGATCGACTATAGCGGCCACCAGTACTGTGATGAGCACCAGTCACAATGGTTTTTGTATCGCCAATAAGAGTATTCAA TTTGATAGCCCTACAACGCCCTTTAAACGCTATCAACCAGTCATTCGTTTCGACAAAACCGAGTTGATTAGGCGTTTAAA AGGCAAGGGCAAAGGCATTTATTCGGGAACAGTAACAGGGGTGATAAGTTACGGCTTTAAGGCCAATATTTCAGAGGCGG TAAAAACCTATCGTAATATCCCCATTACCTTTTCGATGCAGATAGCCTATAACCCCAGTGTGATCAGTCGCATCAACGTA TTGGGTAATGGCCATATGACGCCGAAATATGACACTTACAAGCATACGGTGAGTGGCCATACCGGCTTTAAAGTCTCAGT GTTAGGCCAGTTTCAAAATGGGCTTAAGTTCAGGCTAATCAATAAAGATGCTGATGACTATAGTTTAAAGCCTGACTCAG GCGGCGCCACCGAGATCCCATACAGTATTAGTTGCCAAGGGTGTAGCTCACAATCTGAGCTGGTAGCAGATGGTCAAGTT GTTGAAAAGGGGCAAGCACAAATAGATGCGCCGGGGGCTAGCATGATCCCTTTTATGCTCAATGTCGGCTATGAAAACGT GTCGGTTAATGACGTAGAAGAGCAGCGTTATAGCGATAATTTTACCCTGATGTTTGAGGTTCTGTTATGA
Upstream 100 bases:
>100_bases CATGTGCCTAAGGCACTGCAAGCCGATGATTTAGATGTGATGGTGTTAAACCATGACGAGTCATACCGTGAACAGATCCG TTTGAGCCGGGGAGAGTAAG
Downstream 100 bases:
>100_bases AGCCAATGACCAAAACACTTTTCTGTTTACTCAGTCCTATGTTTGTTTACTCAAGCGCAGCTGTCGCTGAAGGCTATTAC AGCGATGGCGATTTTTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MCFAVIKLACKAGFGAVLTPFAHFSSISLCLLLGASLPVSAFTINGTLTGDKLEWANASSDGAYIRPNYWFTPTRLPETT MWVPGTYTSPTQMNIELSSGAEHVSMPIKLTGVKYQLGGQFSQSPYADIYPACERSTIAATSTVMSTSHNGFCIANKSIQ FDSPTTPFKRYQPVIRFDKTELIRRLKGKGKGIYSGTVTGVISYGFKANISEAVKTYRNIPITFSMQIAYNPSVISRINV LGNGHMTPKYDTYKHTVSGHTGFKVSVLGQFQNGLKFRLINKDADDYSLKPDSGGATEIPYSISCQGCSSQSELVADGQV VEKGQAQIDAPGASMIPFMLNVGYENVSVNDVEEQRYSDNFTLMFEVLL
Sequences:
>Translated_369_residues MCFAVIKLACKAGFGAVLTPFAHFSSISLCLLLGASLPVSAFTINGTLTGDKLEWANASSDGAYIRPNYWFTPTRLPETT MWVPGTYTSPTQMNIELSSGAEHVSMPIKLTGVKYQLGGQFSQSPYADIYPACERSTIAATSTVMSTSHNGFCIANKSIQ FDSPTTPFKRYQPVIRFDKTELIRRLKGKGKGIYSGTVTGVISYGFKANISEAVKTYRNIPITFSMQIAYNPSVISRINV LGNGHMTPKYDTYKHTVSGHTGFKVSVLGQFQNGLKFRLINKDADDYSLKPDSGGATEIPYSISCQGCSSQSELVADGQV VEKGQAQIDAPGASMIPFMLNVGYENVSVNDVEEQRYSDNFTLMFEVLL >Mature_369_residues MCFAVIKLACKAGFGAVLTPFAHFSSISLCLLLGASLPVSAFTINGTLTGDKLEWANASSDGAYIRPNYWFTPTRLPETT MWVPGTYTSPTQMNIELSSGAEHVSMPIKLTGVKYQLGGQFSQSPYADIYPACERSTIAATSTVMSTSHNGFCIANKSIQ FDSPTTPFKRYQPVIRFDKTELIRRLKGKGKGIYSGTVTGVISYGFKANISEAVKTYRNIPITFSMQIAYNPSVISRINV LGNGHMTPKYDTYKHTVSGHTGFKVSVLGQFQNGLKFRLINKDADDYSLKPDSGGATEIPYSISCQGCSSQSELVADGQV VEKGQAQIDAPGASMIPFMLNVGYENVSVNDVEEQRYSDNFTLMFEVLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40245; Mature: 40245
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFAVIKLACKAGFGAVLTPFAHFSSISLCLLLGASLPVSAFTINGTLTGDKLEWANASS CHHHEEEHHHHCCCCHHHHHHHHHHHHHEEEHHCCCCCEEEEEEECEEECCCEEECCCCC DGAYIRPNYWFTPTRLPETTMWVPGTYTSPTQMNIELSSGAEHVSMPIKLTGVKYQLGGQ CCCEECCCEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEECCEEEEEEEEEECCC FSQSPYADIYPACERSTIAATSTVMSTSHNGFCIANKSIQFDSPTTPFKRYQPVIRFDKT CCCCCCCCCCCCCCCCEEEEEHEEEECCCCCEEEECCEEECCCCCCCHHHCCCCEEECHH ELIRRLKGKGKGIYSGTVTGVISYGFKANISEAVKTYRNIPITFSMQIAYNPSVISRINV HHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHEEEEE LGNGHMTPKYDTYKHTVSGHTGFKVSVLGQFQNGLKFRLINKDADDYSLKPDSGGATEIP EECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCC YSISCQGCSSQSELVADGQVVEKGQAQIDAPGASMIPFMLNVGYENVSVNDVEEQRYSDN EEEEECCCCCCCCEEECCCEEECCCCEECCCCCCCCCCEEECCCCCCCCCCHHHHHCCCC FTLMFEVLL EEEEEEEEC >Mature Secondary Structure MCFAVIKLACKAGFGAVLTPFAHFSSISLCLLLGASLPVSAFTINGTLTGDKLEWANASS CHHHEEEHHHHCCCCHHHHHHHHHHHHHEEEHHCCCCCEEEEEEECEEECCCEEECCCCC DGAYIRPNYWFTPTRLPETTMWVPGTYTSPTQMNIELSSGAEHVSMPIKLTGVKYQLGGQ CCCEECCCEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEECCEEEEEEEEEECCC FSQSPYADIYPACERSTIAATSTVMSTSHNGFCIANKSIQFDSPTTPFKRYQPVIRFDKT CCCCCCCCCCCCCCCCEEEEEHEEEECCCCCEEEECCEEECCCCCCCHHHCCCCEEECHH ELIRRLKGKGKGIYSGTVTGVISYGFKANISEAVKTYRNIPITFSMQIAYNPSVISRINV HHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHEEEEE LGNGHMTPKYDTYKHTVSGHTGFKVSVLGQFQNGLKFRLINKDADDYSLKPDSGGATEIP EECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCC YSISCQGCSSQSELVADGQVVEKGQAQIDAPGASMIPFMLNVGYENVSVNDVEEQRYSDN EEEEECCCCCCCCEEECCCEEECCCCEECCCCCCCCCCEEECCCCCCCCCCHHHHHCCCC FTLMFEVLL EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA