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The map label for this gene is yohC [H]

Identifier: 157962509

GI number: 157962509

Start: 3275646

End: 3276242

Strand: Direct

Name: yohC [H]

Synonym: Spea_2688

Alternate gene names: 157962509

Gene position: 3275646-3276242 (Clockwise)

Preceding gene: 157962507

Following gene: 157962513

Centisome position: 63.3

GC content: 46.57

Gene sequence:

>597_bases
ATGATACTGAATCACTTAATGGGGCTATACACTCATCCTAAAGAAGAGTGGCAAACAATTGAGAAAAACCACGAAGCGCT
GCGCAGCAGTTTGAGTCACATCATCATCGTCGCGCTCATACCTGCTATCTGTTCCTTTATTGCCACATCTCAAATAGGCT
GGGACTTAGGTGTTGGCGATCGTCAGTTCCTCACTATGCAAAGCGCGTTATTCATGTCTACAGGCATGTATTTCGGATTA
ATCGCCGGAGTCTTTGCCCTCGCCTATCTAGCTTTCTGGATGGCAAAAACATTCGATGCAACACCCAGCTACACTCAAGC
GCTTGAGCTTGCAGCCTATACTGCAACGCCGCTGTTTATGGTTGGGTTATCAGCGTTATATCCAACCCTCTGGTTTATTA
TGGTCATTGGTCTTGCTGGCCTCGCCTATTCGGTTTACCTGCTTTACACTGGTGTTCCTATCATAATGAATATCCCCGAA
GAGAAAGGCTTTATTTATGCCAGCTCTGTTGTGACAGCGGGCTTAGTGTTACTGGTCGGGCTCATGGCTTCAAGCGTGAT
CCTTTGGAGCATTGGTTTCGGACCTATGTATCAATAG

Upstream 100 bases:

>100_bases
ATTTTGTTCAATAAATAACCTTAGAGCTGTAACAAGTTCGTCTGCAGTTTGGCGAGCCTAATTTAATCTAAAAGTTAAAT
GCTAAACGAGGATAACTATA

Downstream 100 bases:

>100_bases
ATAACACTGAAGTTTAAGCAACAAAAAAGCCGACATGATGTCGGCTTTTTTAGCCTTAACGCTAAGCTCAAAAAGATTTA
CTCGAAAGTGTCTCTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MILNHLMGLYTHPKEEWQTIEKNHEALRSSLSHIIIVALIPAICSFIATSQIGWDLGVGDRQFLTMQSALFMSTGMYFGL
IAGVFALAYLAFWMAKTFDATPSYTQALELAAYTATPLFMVGLSALYPTLWFIMVIGLAGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVGLMASSVILWSIGFGPMYQ

Sequences:

>Translated_198_residues
MILNHLMGLYTHPKEEWQTIEKNHEALRSSLSHIIIVALIPAICSFIATSQIGWDLGVGDRQFLTMQSALFMSTGMYFGL
IAGVFALAYLAFWMAKTFDATPSYTQALELAAYTATPLFMVGLSALYPTLWFIMVIGLAGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVGLMASSVILWSIGFGPMYQ
>Mature_198_residues
MILNHLMGLYTHPKEEWQTIEKNHEALRSSLSHIIIVALIPAICSFIATSQIGWDLGVGDRQFLTMQSALFMSTGMYFGL
IAGVFALAYLAFWMAKTFDATPSYTQALELAAYTATPLFMVGLSALYPTLWFIMVIGLAGLAYSVYLLYTGVPIIMNIPE
EKGFIYASSVVTAGLVLLVGLMASSVILWSIGFGPMYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=192, Percent_Identity=38.0208333333333, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 21728; Mature: 21728

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNHLMGLYTHPKEEWQTIEKNHEALRSSLSHIIIVALIPAICSFIATSQIGWDLGVGD
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RQFLTMQSALFMSTGMYFGLIAGVFALAYLAFWMAKTFDATPSYTQALELAAYTATPLFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VGLSALYPTLWFIMVIGLAGLAYSVYLLYTGVPIIMNIPEEKGFIYASSVVTAGLVLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHHHHHH
LMASSVILWSIGFGPMYQ
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MILNHLMGLYTHPKEEWQTIEKNHEALRSSLSHIIIVALIPAICSFIATSQIGWDLGVGD
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RQFLTMQSALFMSTGMYFGLIAGVFALAYLAFWMAKTFDATPSYTQALELAAYTATPLFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VGLSALYPTLWFIMVIGLAGLAYSVYLLYTGVPIIMNIPEEKGFIYASSVVTAGLVLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHHHHHH
LMASSVILWSIGFGPMYQ
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]