Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962473
Identifier: 157962473
GI number: 157962473
Start: 3228160
End: 3228942
Strand: Reverse
Name: 157962473
Synonym: Spea_2652
Alternate gene names: NA
Gene position: 3228942-3228160 (Counterclockwise)
Preceding gene: 157962474
Following gene: 157962472
Centisome position: 62.4
GC content: 43.81
Gene sequence:
>783_bases ATGTCCAAGGTAAGCAATAAAACAAAAATCGCTACAGCGCTCATTGGCGCACTAGCCTTAGCAGGCAGCAACTTAGTGAT TGCCGATCCTCTTTCTGACGCTCAGAAAGCTGACGCTAAAATTCACGCTGAAGCTGCAACGTCTCAGAAGAAAGTTGATA AGTATTTTGACCAAGCTCAGGATATGTTGTTCGAGTATGGGTCAGTTGCTGATGAACGTGAATCACTAAAATCTTATAAC GACTACGTAGCAGGTCTGGTTGCAGATCAAGAAGCTACCATGAAATCAATTCAAGATGACATCAACGGCGTTGATGCATT ACGTCAAGGCGTAGTGCCATTGATGTTTAAGATGGTTGATGCACTAGAGCAATTTGTTGCTCTTGATCTTCCATTCAACA CTGAGGTTCGCGTCGAGCGTGTTGAGAACCTTAAGAACCTTCTAAACAGTGCAGAGGTTACTCTTGCTGAAAAGTATCGT CTAATCCTAGATGCTTACTCAATAGAACGTGAGTACGGCTTCTCTTCTAATGTTAAGCAAGGTCAGCTTCAGCTTGATGG TAAAGAAGTGTTAGTTGACTTCTTTAATCTTGGTCGCGTTGCTTTATATGCGATGAGCTTGGATCAAAAGTCGGCTTGGA TGTATAACGATGAGACTAAAGGCTGGGATCAACTAGAAGCTAGCTCTCTTCGTGAGCTGACTAAAGGTATTCGCATGGCC CGTAAACAGGGTGCACCGGATCTATTCTCGTTACCAATTCCTGCTGCGGAGGCTGCACAATAA
Upstream 100 bases:
>100_bases AGACAGGCTTAGGCAATAGGGAACTAAAGCAAAATAAGCGCATGCACCCTGTTGTCGATAAGTTAAAGCTTTTTTAATCA CTTCAAATTGGTTGGGAACT
Downstream 100 bases:
>100_bases TGAAGAAGTTTATCACTACAGCAATCGTAGCTGCGAGCCTGTCATTAACAGCAGGTATTGCTCATGCTGCAGATGCACCA AAAACAATCGACCAACTACT
Product: hypothetical protein
Products: NA
Alternate protein names: Chromosome Segregation ATPase; MotA/lQ/ExbB Proton Channel
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYN DYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYR LILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA RKQGAPDLFSLPIPAAEAAQ
Sequences:
>Translated_260_residues MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYN DYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYR LILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA RKQGAPDLFSLPIPAAEAAQ >Mature_259_residues SKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYND YVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRL ILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMAR KQGAPDLFSLPIPAAEAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28742; Mature: 28611
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQ CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRLILDAYSIEREYGFSSNVKQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH RKQGAPDLFSLPIPAAEAAQ HHCCCCCEEECCCCCCCCCC >Mature Secondary Structure SKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQ CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRLILDAYSIEREYGFSSNVKQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH RKQGAPDLFSLPIPAAEAAQ HHCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA