Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962473

Identifier: 157962473

GI number: 157962473

Start: 3228160

End: 3228942

Strand: Reverse

Name: 157962473

Synonym: Spea_2652

Alternate gene names: NA

Gene position: 3228942-3228160 (Counterclockwise)

Preceding gene: 157962474

Following gene: 157962472

Centisome position: 62.4

GC content: 43.81

Gene sequence:

>783_bases
ATGTCCAAGGTAAGCAATAAAACAAAAATCGCTACAGCGCTCATTGGCGCACTAGCCTTAGCAGGCAGCAACTTAGTGAT
TGCCGATCCTCTTTCTGACGCTCAGAAAGCTGACGCTAAAATTCACGCTGAAGCTGCAACGTCTCAGAAGAAAGTTGATA
AGTATTTTGACCAAGCTCAGGATATGTTGTTCGAGTATGGGTCAGTTGCTGATGAACGTGAATCACTAAAATCTTATAAC
GACTACGTAGCAGGTCTGGTTGCAGATCAAGAAGCTACCATGAAATCAATTCAAGATGACATCAACGGCGTTGATGCATT
ACGTCAAGGCGTAGTGCCATTGATGTTTAAGATGGTTGATGCACTAGAGCAATTTGTTGCTCTTGATCTTCCATTCAACA
CTGAGGTTCGCGTCGAGCGTGTTGAGAACCTTAAGAACCTTCTAAACAGTGCAGAGGTTACTCTTGCTGAAAAGTATCGT
CTAATCCTAGATGCTTACTCAATAGAACGTGAGTACGGCTTCTCTTCTAATGTTAAGCAAGGTCAGCTTCAGCTTGATGG
TAAAGAAGTGTTAGTTGACTTCTTTAATCTTGGTCGCGTTGCTTTATATGCGATGAGCTTGGATCAAAAGTCGGCTTGGA
TGTATAACGATGAGACTAAAGGCTGGGATCAACTAGAAGCTAGCTCTCTTCGTGAGCTGACTAAAGGTATTCGCATGGCC
CGTAAACAGGGTGCACCGGATCTATTCTCGTTACCAATTCCTGCTGCGGAGGCTGCACAATAA

Upstream 100 bases:

>100_bases
AGACAGGCTTAGGCAATAGGGAACTAAAGCAAAATAAGCGCATGCACCCTGTTGTCGATAAGTTAAAGCTTTTTTAATCA
CTTCAAATTGGTTGGGAACT

Downstream 100 bases:

>100_bases
TGAAGAAGTTTATCACTACAGCAATCGTAGCTGCGAGCCTGTCATTAACAGCAGGTATTGCTCATGCTGCAGATGCACCA
AAAACAATCGACCAACTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Chromosome Segregation ATPase; MotA/lQ/ExbB Proton Channel

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYN
DYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYR
LILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA
RKQGAPDLFSLPIPAAEAAQ

Sequences:

>Translated_260_residues
MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYN
DYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYR
LILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA
RKQGAPDLFSLPIPAAEAAQ
>Mature_259_residues
SKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQDMLFEYGSVADERESLKSYND
YVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVDALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRL
ILDAYSIEREYGFSSNVKQGQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMAR
KQGAPDLFSLPIPAAEAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28742; Mature: 28611

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQ
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DMLFEYGSVADERESLKSYNDYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVD
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRLILDAYSIEREYGFSSNVKQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA
CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
RKQGAPDLFSLPIPAAEAAQ
HHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SKVSNKTKIATALIGALALAGSNLVIADPLSDAQKADAKIHAEAATSQKKVDKYFDQAQ
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DMLFEYGSVADERESLKSYNDYVAGLVADQEATMKSIQDDINGVDALRQGVVPLMFKMVD
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQFVALDLPFNTEVRVERVENLKNLLNSAEVTLAEKYRLILDAYSIEREYGFSSNVKQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQLQLDGKEVLVDFFNLGRVALYAMSLDQKSAWMYNDETKGWDQLEASSLRELTKGIRMA
CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
RKQGAPDLFSLPIPAAEAAQ
HHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA