Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is bla [H]
Identifier: 157962458
GI number: 157962458
Start: 3215044
End: 3215883
Strand: Reverse
Name: bla [H]
Synonym: Spea_2637
Alternate gene names: 157962458
Gene position: 3215883-3215044 (Counterclockwise)
Preceding gene: 157962459
Following gene: 157962455
Centisome position: 62.15
GC content: 44.64
Gene sequence:
>840_bases ATGACTATTTTAAAAAATCACTCGAGTATTTGGCTATTGTTTTATCTTCTGTTATCAGCTGTAGCTGTTATGCCTATAAT GGCCTCAGCAGCCTATGAAGAGCAGTCTGACTGGCAGGCACACTTTGACAAGTATCATGCCAAGGGGACGATAGTCGTAC TTGATAAACGTGATGCAACGGCTAAAGCTATGGTCCTAGATAACCAGCGAGCGCATAAACGTTATTCGCCGGCGTCGACA TTCAAAATTCCCCATAGTCTGTTTGCCCTAGACTCGAATTTAGTAAAAGACGAGTTTCAAGTCTTTAACTGGGATGGTAT TGAACGCAGTTACTCACCGCACAATCAAGATCAGAACCTACGCTCTGCCATGCGAAGTTCTGCTGTTTGGGTTTATGATG AATTTGCTAAGCAGTTAGGTGAGAGTAAGGCTCAGAATTATTTATCGCTCATCGATTACGGTAATGCGGATCCGAGCTTT GAGCATTCAAGTACTGACGGTAGCAGTTACTGGATTGACGGTAAGCTGGCGATTTCAGCCGCGGAGCAAGTTGAATTCCT ACAAAAGCTGTATCGAAATCAATTGCCATTTGAATTGGCAGCTCAGCTCTTAGTCAAAGATATTATGATTGTTGAAGCGG GAAGAGATTGGATTTTACGGGCAAAAACAGGCTGGCAGGGGCAACATGGCTGGTGGGTCGGTTGGGTTGAGTGGCCAACA GGACCGGTGTTTTTTGCACTTAATATCGATACGCCAAATAGAATGCAAGATCTCTATAAGCGAGAGGCTATCGTACGAGA AGTGCTGCAATCAATCGATGCTCTACCTGCTGGGCAGTAA
Upstream 100 bases:
>100_bases TATCAGACCGTTAGTGGTTGTGATGTCTATTGCCATGAGCGTTAAGCTATTATCAAGCCAGTACGACCTGTTTGCTTGGT TTTAATCGAGATCTTCAAGG
Downstream 100 bases:
>100_bases TCCCTTTACTAACTCACTTTTTTTCAGCCCTAAACCACCTACTTAGAAGGCGGATTCTTTGCTTAGGCTAGCTCCTTAAA ATTAAAAGCCCCTTAGTGCT
Product: beta-lactamase
Products: NA
Alternate protein names: Penicillinase [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTILKNHSSIWLLFYLLLSAVAVMPIMASAAYEEQSDWQAHFDKYHAKGTIVVLDKRDATAKAMVLDNQRAHKRYSPAST FKIPHSLFALDSNLVKDEFQVFNWDGIERSYSPHNQDQNLRSAMRSSAVWVYDEFAKQLGESKAQNYLSLIDYGNADPSF EHSSTDGSSYWIDGKLAISAAEQVEFLQKLYRNQLPFELAAQLLVKDIMIVEAGRDWILRAKTGWQGQHGWWVGWVEWPT GPVFFALNIDTPNRMQDLYKREAIVREVLQSIDALPAGQ
Sequences:
>Translated_279_residues MTILKNHSSIWLLFYLLLSAVAVMPIMASAAYEEQSDWQAHFDKYHAKGTIVVLDKRDATAKAMVLDNQRAHKRYSPAST FKIPHSLFALDSNLVKDEFQVFNWDGIERSYSPHNQDQNLRSAMRSSAVWVYDEFAKQLGESKAQNYLSLIDYGNADPSF EHSSTDGSSYWIDGKLAISAAEQVEFLQKLYRNQLPFELAAQLLVKDIMIVEAGRDWILRAKTGWQGQHGWWVGWVEWPT GPVFFALNIDTPNRMQDLYKREAIVREVLQSIDALPAGQ >Mature_278_residues TILKNHSSIWLLFYLLLSAVAVMPIMASAAYEEQSDWQAHFDKYHAKGTIVVLDKRDATAKAMVLDNQRAHKRYSPASTF KIPHSLFALDSNLVKDEFQVFNWDGIERSYSPHNQDQNLRSAMRSSAVWVYDEFAKQLGESKAQNYLSLIDYGNADPSFE HSSTDGSSYWIDGKLAISAAEQVEFLQKLYRNQLPFELAAQLLVKDIMIVEAGRDWILRAKTGWQGQHGWWVGWVEWPTG PVFFALNIDTPNRMQDLYKREAIVREVLQSIDALPAGQ
Specific function: This is an oxacillin-hydrolyzing beta-lactamase [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-D beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR002137 - InterPro: IPR001460 [H]
Pfam domain/function: PF00905 Transpeptidase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31891; Mature: 31760
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00337 BETA_LACTAMASE_D
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILKNHSSIWLLFYLLLSAVAVMPIMASAAYEEQSDWQAHFDKYHAKGTIVVLDKRDAT CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCC AKAMVLDNQRAHKRYSPASTFKIPHSLFALDSNLVKDEFQVFNWDGIERSYSPHNQDQNL EEEEEECCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHH RSAMRSSAVWVYDEFAKQLGESKAQNYLSLIDYGNADPSFEHSSTDGSSYWIDGKLAISA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEHH AEQVEFLQKLYRNQLPFELAAQLLVKDIMIVEAGRDWILRAKTGWQGQHGWWVGWVEWPT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEEEEEEECCC GPVFFALNIDTPNRMQDLYKREAIVREVLQSIDALPAGQ CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TILKNHSSIWLLFYLLLSAVAVMPIMASAAYEEQSDWQAHFDKYHAKGTIVVLDKRDAT CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCC AKAMVLDNQRAHKRYSPASTFKIPHSLFALDSNLVKDEFQVFNWDGIERSYSPHNQDQNL EEEEEECCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHH RSAMRSSAVWVYDEFAKQLGESKAQNYLSLIDYGNADPSFEHSSTDGSSYWIDGKLAISA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEHH AEQVEFLQKLYRNQLPFELAAQLLVKDIMIVEAGRDWILRAKTGWQGQHGWWVGWVEWPT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEEEEEEECCC GPVFFALNIDTPNRMQDLYKREAIVREVLQSIDALPAGQ CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9687410 [H]