Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962441
Identifier: 157962441
GI number: 157962441
Start: 3190435
End: 3191115
Strand: Reverse
Name: 157962441
Synonym: Spea_2620
Alternate gene names: NA
Gene position: 3191115-3190435 (Counterclockwise)
Preceding gene: 157962442
Following gene: 157962440
Centisome position: 61.67
GC content: 45.67
Gene sequence:
>681_bases ATGAACCTACTTAGCAGTATCAACAATGCAGTAAATAGTAATACGCTATCTGACGCCTATGGCGTTAATAGGGAACAGTC AAATGTTGCCAATGCTGAAAACATTACAGCAAATAGTGGCAAACAGACTCTAACTGCGACAGAGCTGACTAAGAATGACA ATACCTTAGTCTTGTCAGGCCGCGCCGAGAGAGCGCAGAAAATCGAAGCGATGGCTGATGACTTCTTTAAAGGAGGCCAG TTCACCTCAGCCAAGCTGCCTTCACTTATCCAACGACTGTACCAAGATGGCATTCTTTCCGAAGGGCAACTCAATCGCTT ATCGAATAGTGGATTTGAGCTCCCTCCTGCCGATGAACAATCTCTATCTGACTTTATTGACCAGCAAGCTTCGGCTTTGA GTGATAGTGAAGGCGATAAAAAGCTGGCACAGATGCTTGACGATGCTAAGTGGGTTATGGGGGCAATGGATTTTTCTCAG TCCCCTTTGGTTGCCCAAAAAGCTAACCGTGTATCTAGCCAGATAACTGAGCTGTTAAACTCGGAAAAATCGCTGAGCGA AACGCAAGTGGACCAGTACAAAGGGCTTAAAGCATTGATGCAGTTAACTTCCATGACGGGAGAGCATCAACAGGAGAATG GTCAGCTTAATAGCTACCTCGCTCTCGCTAACAAGCATTAG
Upstream 100 bases:
>100_bases ATGAGTTGACGCAAAAATAGGCAGTTGATTTTCAACTTGATAAATCGGCACACTAAATGCTTTAACAAGGTTATATTCAG TTAACGCCGGCTTTTTGACG
Downstream 100 bases:
>100_bases CAATTATTGTTCTTTATTACACCTTAAAAATTTCAATCTTTGGTCAACATATTCTGTAAAAACCGGCTTAGATGGAGCAT TTATCAGCCCCTTTTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNLLSSINNAVNSNTLSDAYGVNREQSNVANAENITANSGKQTLTATELTKNDNTLVLSGRAERAQKIEAMADDFFKGGQ FTSAKLPSLIQRLYQDGILSEGQLNRLSNSGFELPPADEQSLSDFIDQQASALSDSEGDKKLAQMLDDAKWVMGAMDFSQ SPLVAQKANRVSSQITELLNSEKSLSETQVDQYKGLKALMQLTSMTGEHQQENGQLNSYLALANKH
Sequences:
>Translated_226_residues MNLLSSINNAVNSNTLSDAYGVNREQSNVANAENITANSGKQTLTATELTKNDNTLVLSGRAERAQKIEAMADDFFKGGQ FTSAKLPSLIQRLYQDGILSEGQLNRLSNSGFELPPADEQSLSDFIDQQASALSDSEGDKKLAQMLDDAKWVMGAMDFSQ SPLVAQKANRVSSQITELLNSEKSLSETQVDQYKGLKALMQLTSMTGEHQQENGQLNSYLALANKH >Mature_226_residues MNLLSSINNAVNSNTLSDAYGVNREQSNVANAENITANSGKQTLTATELTKNDNTLVLSGRAERAQKIEAMADDFFKGGQ FTSAKLPSLIQRLYQDGILSEGQLNRLSNSGFELPPADEQSLSDFIDQQASALSDSEGDKKLAQMLDDAKWVMGAMDFSQ SPLVAQKANRVSSQITELLNSEKSLSETQVDQYKGLKALMQLTSMTGEHQQENGQLNSYLALANKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24611; Mature: 24611
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLSSINNAVNSNTLSDAYGVNREQSNVANAENITANSGKQTLTATELTKNDNTLVLSG CCHHHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEEC RAERAQKIEAMADDFFKGGQFTSAKLPSLIQRLYQDGILSEGQLNRLSNSGFELPPADEQ CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHH SLSDFIDQQASALSDSEGDKKLAQMLDDAKWVMGAMDFSQSPLVAQKANRVSSQITELLN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SEKSLSETQVDQYKGLKALMQLTSMTGEHQQENGQLNSYLALANKH CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCC >Mature Secondary Structure MNLLSSINNAVNSNTLSDAYGVNREQSNVANAENITANSGKQTLTATELTKNDNTLVLSG CCHHHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEEC RAERAQKIEAMADDFFKGGQFTSAKLPSLIQRLYQDGILSEGQLNRLSNSGFELPPADEQ CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHH SLSDFIDQQASALSDSEGDKKLAQMLDDAKWVMGAMDFSQSPLVAQKANRVSSQITELLN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SEKSLSETQVDQYKGLKALMQLTSMTGEHQQENGQLNSYLALANKH CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA