Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is aroH [H]
Identifier: 157962372
GI number: 157962372
Start: 3104684
End: 3105751
Strand: Direct
Name: aroH [H]
Synonym: Spea_2551
Alternate gene names: 157962372
Gene position: 3104684-3105751 (Clockwise)
Preceding gene: 157962371
Following gene: 157962374
Centisome position: 60.0
GC content: 45.79
Gene sequence:
>1068_bases ATGACCATTAAAACAGACGAACTCCGCACTTCCCTTTTATGTAAGGTAATTTCACCTGCACAACTCGCTTCTGAATATCC TTTAACGCAAGATGCCGCTGACTACCTAGTTCAGCAACGTCATGAGGTCGAAGCCATTATTAATGGTGAAGACCAACGTT TACTTGTGATTATTGGTCCTTGCTCAATCCATGACACAGAAGCGGCTCTAGATTACGCAAAACGCTTAGCTGAACTACAC CAGCAATATAAAGATGATTTATGCATCTTAATGCGTGTCTATTTTGAGAAGCCTCGTACAACAGTCGGATGGAAAGGACT TATCTCAGATCCTGATCTAGACGGTAGCTTTAGCCCTAATAAAGGCCTACGTAAAGCACGTCATCTACTGCAGCAGATCA CTGAGCTTAAGTTACCTATCGCGACAGAGTTTCTCGATATGGTAAACGGCCAGTACATCGCCGATCTGATTACTTGGGGC GCTATTGGTGCTCGTACGACTGAAAGTCAGATCCACCGTGAGATGGCTTCAGCGCTTTCTTGCCCTGTAGGCTTTAAAAA CGGTACCGATGGTAATATCGATATCGCTGTTGATGCTGTTCGTGCCGCGCAAGCGCCGCACATCTTCTACTCTCCTGACA AAGATGGTGCAATGGCGGTTTACCGTACTCACGGTAACCCTTATGGCCACATCATCTTACGTGGTGGCAAACAGCCAAAC TACCATAGCGACGATATCGCAAAAGCTGCGGCTCAGCTTGATAGCGTCGGTGTGACTCAGAGAATGGTTGTTGATTTCAG CCATGGCAATAGCCGTAAGATGCATAAAGAGCAGCTTAATGTCGCTGACTCAATCATGCAGCAAATGGCTAATGGCGAAA CGGCTATCGCTGGCATTATGGCTGAAAGCTTTATCGAAGAAGGCAATCAAAAAGTGGTTGCAGGTGAAGAGCTCATCTAC GGTAAGAGCATCACCGATGCTTGCATTGACTGGGAAGACTCAAAAGTCTTACTAAGTGATCTGGCTAAGGCTTCACGCGC AAGAATAGAATTGCTTAAGCAAAAATAA
Upstream 100 bases:
>100_bases TAGCCTCACTTTTAAGGCAATTGCCACTGTGCACAGCCAAACTATTAGTTATAATCCGAGGTAATCAGGCGATAGCCCAT ACGAACGCTCGGTATTTTGA
Downstream 100 bases:
>100_bases TTCGCTAACGCATATCTTATGCTTCAGCTTAATCTAGAAACGTACCCACTCACCGAGTCGGTACGTTTTTTTATATCTTA AAATAGTTGTCTGTACATTC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRHEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAKRLAELH QQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWG AIGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPYGHIILRGGKQPN YHSDDIAKAAAQLDSVGVTQRMVVDFSHGNSRKMHKEQLNVADSIMQQMANGETAIAGIMAESFIEEGNQKVVAGEELIY GKSITDACIDWEDSKVLLSDLAKASRARIELLKQK
Sequences:
>Translated_355_residues MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRHEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAKRLAELH QQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWG AIGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPYGHIILRGGKQPN YHSDDIAKAAAQLDSVGVTQRMVVDFSHGNSRKMHKEQLNVADSIMQQMANGETAIAGIMAESFIEEGNQKVVAGEELIY GKSITDACIDWEDSKVLLSDLAKASRARIELLKQK >Mature_354_residues TIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRHEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAKRLAELHQ QYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPYGHIILRGGKQPNY HSDDIAKAAAQLDSVGVTQRMVVDFSHGNSRKMHKEQLNVADSIMQQMANGETAIAGIMAESFIEEGNQKVVAGEELIYG KSITDACIDWEDSKVLLSDLAKASRARIELLKQK
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=63.2947976878613, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI1786969, Length=348, Percent_Identity=54.8850574712644, Blast_Score=398, Evalue=1e-112, Organism=Escherichia coli, GI1788953, Length=327, Percent_Identity=50.4587155963303, Blast_Score=343, Evalue=7e-96, Organism=Saccharomyces cerevisiae, GI6319726, Length=340, Percent_Identity=51.7647058823529, Blast_Score=342, Evalue=5e-95, Organism=Saccharomyces cerevisiae, GI6320240, Length=344, Percent_Identity=47.6744186046512, Blast_Score=325, Evalue=7e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39220; Mature: 39089
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRHEVEAIINGEDQRLLVIIGP CCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEC CSIHDTEAALDYAKRLAELHQQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGAIGARTTESQIHREMASALS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC CPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPYGHIILRGGKQPN CCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCC YHSDDIAKAAAQLDSVGVTQRMVVDFSHGNSRKMHKEQLNVADSIMQQMANGETAIAGIM CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH AESFIEEGNQKVVAGEELIYGKSITDACIDWEDSKVLLSDLAKASRARIELLKQK HHHHHHCCCCEEEECCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRHEVEAIINGEDQRLLVIIGP CCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEC CSIHDTEAALDYAKRLAELHQQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGAIGARTTESQIHREMASALS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC CPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPYGHIILRGGKQPN CCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCC YHSDDIAKAAAQLDSVGVTQRMVVDFSHGNSRKMHKEQLNVADSIMQQMANGETAIAGIM CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH AESFIEEGNQKVVAGEELIYGKSITDACIDWEDSKVLLSDLAKASRARIELLKQK HHHHHHCCCCEEEECCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]