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The map label for this gene is slyA [C]

Identifier: 157962367

GI number: 157962367

Start: 3096901

End: 3097314

Strand: Reverse

Name: slyA [C]

Synonym: Spea_2546

Alternate gene names: 157962367

Gene position: 3097314-3096901 (Counterclockwise)

Preceding gene: 157962368

Following gene: 157962366

Centisome position: 59.86

GC content: 42.27

Gene sequence:

>414_bases
TTGAATCGATTTGAGAGTCTTGGTTACTTGGTGTCTCATTTAAATGTAGATCTACAAAATGCGCTAGATCAACGTCTTAA
GCGGTACCAACTAGATATTAAACTTTGGCCAGTGTTGTTTTCACTCTGGCAAGAGGAAGGTGTAACTCAAACCACGCTCT
CTAAGCGTTGTGATGTCGCAAACTACACCATGACTCGATTGCTCGATCAGTTACAGCAACAGGGCTTGATAGCTCGTCAT
CAGGATGCGGAGAATCGCCGCGCCTTCCAGATATATCTTACCGATAGTGGAAAAGCACTCGAGCAAGATCTCGTTCGTGA
AGCCGAACGGGTGAATGAAGCCTTTTTAGATAATTTAGCGATTGAAGAGCGAAAAAGCTTCTTAAGTTTGTTGAATAAAA
TCAATCGTTATTAG

Upstream 100 bases:

>100_bases
TGTTTGATTGAATGTGAGCAATAAACACGCCCTAAAGCTAGTTTCTTTCGGTGTAAGTGATAAGATTAACTCAAGCCCGA
AAGAGCCTTGGAGGTGTTGA

Downstream 100 bases:

>100_bases
TTTTCTCCTCATTATTTGTGTCATCAAGCTATGCTCTTGGCATAGATAGCTCAATCCGTTAGGCTCTTGTTATCTTGATA
ATTTAGTGGAGTCACTATGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator MarR; Transcription Regulator Protein; Regulatory Protein MarR; Transcriptional Regulator Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNRFESLGYLVSHLNVDLQNALDQRLKRYQLDIKLWPVLFSLWQEEGVTQTTLSKRCDVANYTMTRLLDQLQQQGLIARH
QDAENRRAFQIYLTDSGKALEQDLVREAERVNEAFLDNLAIEERKSFLSLLNKINRY

Sequences:

>Translated_137_residues
MNRFESLGYLVSHLNVDLQNALDQRLKRYQLDIKLWPVLFSLWQEEGVTQTTLSKRCDVANYTMTRLLDQLQQQGLIARH
QDAENRRAFQIYLTDSGKALEQDLVREAERVNEAFLDNLAIEERKSFLSLLNKINRY
>Mature_137_residues
MNRFESLGYLVSHLNVDLQNALDQRLKRYQLDIKLWPVLFSLWQEEGVTQTTLSKRCDVANYTMTRLLDQLQQQGLIARH
QDAENRRAFQIYLTDSGKALEQDLVREAERVNEAFLDNLAIEERKSFLSLLNKINRY

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16161; Mature: 16161

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFESLGYLVSHLNVDLQNALDQRLKRYQLDIKLWPVLFSLWQEEGVTQTTLSKRCDVA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
NYTMTRLLDQLQQQGLIARHQDAENRRAFQIYLTDSGKALEQDLVREAERVNEAFLDNLA
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IEERKSFLSLLNKINRY
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRFESLGYLVSHLNVDLQNALDQRLKRYQLDIKLWPVLFSLWQEEGVTQTTLSKRCDVA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
NYTMTRLLDQLQQQGLIARHQDAENRRAFQIYLTDSGKALEQDLVREAERVNEAFLDNLA
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IEERKSFLSLLNKINRY
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA