Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962366
Identifier: 157962366
GI number: 157962366
Start: 3096391
End: 3096804
Strand: Reverse
Name: 157962366
Synonym: Spea_2545
Alternate gene names: NA
Gene position: 3096804-3096391 (Counterclockwise)
Preceding gene: 157962367
Following gene: 157962363
Centisome position: 59.85
GC content: 46.86
Gene sequence:
>414_bases ATGAGAGTTCTACTGGTCGCATTATTTGTTATACCGTTATTGAGCGCCTGCTCGGTGAATATTCATAAGCCAAAACCTCA ATTGCAGTCTGCAGCCTCTACGGAACGAGTTGATGGTGCCGGCTTTATTGAAGCTATCGAGTTAGCGAGTGGCGCAAGCT TAGTGATTGAAGAGGGGCGCTTGGAGCCTCGCTCGATTGGTAGCGTGACAGTTAAGCTCTACCGTGATTTGAATGTTGGC GACTTTGCCGGTGCCGTGAATTTTGTGCGAGATGGCACAATCTTAAAAGCAGTCTTAATTGAAAATGGCAGTGATAAGCA AAAGTTGTCGATAACGATGGTGACGGCGGGGAGTGGAAATTATCAGGCGAGTCAGTTGGTTTGCATCCAAGGTGACAGTA TTTCACTATGCTAG
Upstream 100 bases:
>100_bases TTAGTTTTCTCCTCATTATTTGTGTCATCAAGCTATGCTCTTGGCATAGATAGCTCAATCCGTTAGGCTCTTGTTATCTT GATAATTTAGTGGAGTCACT
Downstream 100 bases:
>100_bases CTGCAGTTTTGGTTTTATAGCTTTCAGTTATAAAGTTTAAAGTACTTTAGGTTAGCGTTCACCGTTAACTTAAAGTGAGT AGCAACACGATAATTATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRVLLVALFVIPLLSACSVNIHKPKPQLQSAASTERVDGAGFIEAIELASGASLVIEEGRLEPRSIGSVTVKLYRDLNVG DFAGAVNFVRDGTILKAVLIENGSDKQKLSITMVTAGSGNYQASQLVCIQGDSISLC
Sequences:
>Translated_137_residues MRVLLVALFVIPLLSACSVNIHKPKPQLQSAASTERVDGAGFIEAIELASGASLVIEEGRLEPRSIGSVTVKLYRDLNVG DFAGAVNFVRDGTILKAVLIENGSDKQKLSITMVTAGSGNYQASQLVCIQGDSISLC >Mature_137_residues MRVLLVALFVIPLLSACSVNIHKPKPQLQSAASTERVDGAGFIEAIELASGASLVIEEGRLEPRSIGSVTVKLYRDLNVG DFAGAVNFVRDGTILKAVLIENGSDKQKLSITMVTAGSGNYQASQLVCIQGDSISLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14447; Mature: 14447
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLVALFVIPLLSACSVNIHKPKPQLQSAASTERVDGAGFIEAIELASGASLVIEEGR CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHEEHHCCCCEEEEECCC LEPRSIGSVTVKLYRDLNVGDFAGAVNFVRDGTILKAVLIENGSDKQKLSITMVTAGSGN CCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCC YQASQLVCIQGDSISLC CCCEEEEEEECCCCCCC >Mature Secondary Structure MRVLLVALFVIPLLSACSVNIHKPKPQLQSAASTERVDGAGFIEAIELASGASLVIEEGR CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHEEHHCCCCEEEEECCC LEPRSIGSVTVKLYRDLNVGDFAGAVNFVRDGTILKAVLIENGSDKQKLSITMVTAGSGN CCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCC YQASQLVCIQGDSISLC CCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA