Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is nfnB [C]
Identifier: 157962331
GI number: 157962331
Start: 3058779
End: 3059435
Strand: Direct
Name: nfnB [C]
Synonym: Spea_2510
Alternate gene names: 157962331
Gene position: 3058779-3059435 (Clockwise)
Preceding gene: 157962329
Following gene: 157962333
Centisome position: 59.11
GC content: 43.38
Gene sequence:
>657_bases ATGACTCACCCTATTATTGCTGATCTTCAAAGCCGTTATACAACAAAGCGCTATGATGCGTCTAAGCGTATTCCTCAAGC TGATCTTGATGTGATCTACCAAGCAATGAACCTTTCGGCCTCTTCTATCAATTCACAACCTTGGAAGTTCATTGTAATTG AGAGCGACGAAGCTAAGCAGCGCATGCATGATACCTTTGCCAACAAGTTTCAATTTAATCAGCCGCATATTAAATCTGCA TCACATATCGTACTCTTCGCTCACAACCCTAAATACACGCGTGAAGATTACGCAAAAGTTATCGATAAAGGTATTGCCGA TGGCCGTATGGGAGTTGAAGACAGAGAGCAAGCATTTGGCGCTTTTGCTTTCGTCGAGTTAAATACCGATGAATCGGGTA ACAACGCTGCTTGGACTAAGTCTCAGGCCTATTTAGCCTTAGGCAATACACTGCATACCCTTGCTCGTTTAGGTATCGAC TCCACGACAATGGAAGGAGTTGATAACGAGTTAATTGGTGAGATCTTTAAAGAAGAGCTTGGTGGTTACCAATGTGATGT CGCTTTAGCAATGGGCTACCATGATTCTGAGGAAGACTATAATGCACCTCTACCTAAGTCACGCCTTGCCATGAAGGATG TTGTTCGAGTCCTTTAG
Upstream 100 bases:
>100_bases TGATAATCATTCAACTAAAACACTGTATTTCGAAGATGCTGTTCGATGTAGGATAGCCACAACTTAATTTTGCTTCACCT TTGTTCACTAGGATACATAT
Downstream 100 bases:
>100_bases GTCTGTTGAGTAGATAACAACGGATAACTAAAGCACAATTAAAGTATAACTAGGCTGATATGTAGTAGCTTAGCAGATAA AGGTTCGAGGCTTTTTCCTC
Product: nitroreductase
Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
Alternate protein names: FRASE I [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTHPIIADLQSRYTTKRYDASKRIPQADLDVIYQAMNLSASSINSQPWKFIVIESDEAKQRMHDTFANKFQFNQPHIKSA SHIVLFAHNPKYTREDYAKVIDKGIADGRMGVEDREQAFGAFAFVELNTDESGNNAAWTKSQAYLALGNTLHTLARLGID STTMEGVDNELIGEIFKEELGGYQCDVALAMGYHDSEEDYNAPLPKSRLAMKDVVRVL
Sequences:
>Translated_218_residues MTHPIIADLQSRYTTKRYDASKRIPQADLDVIYQAMNLSASSINSQPWKFIVIESDEAKQRMHDTFANKFQFNQPHIKSA SHIVLFAHNPKYTREDYAKVIDKGIADGRMGVEDREQAFGAFAFVELNTDESGNNAAWTKSQAYLALGNTLHTLARLGID STTMEGVDNELIGEIFKEELGGYQCDVALAMGYHDSEEDYNAPLPKSRLAMKDVVRVL >Mature_217_residues THPIIADLQSRYTTKRYDASKRIPQADLDVIYQAMNLSASSINSQPWKFIVIESDEAKQRMHDTFANKFQFNQPHIKSAS HIVLFAHNPKYTREDYAKVIDKGIADGRMGVEDREQAFGAFAFVELNTDESGNNAAWTKSQAYLALGNTLHTLARLGIDS TTMEGVDNELIGEIFKEELGGYQCDVALAMGYHDSEEDYNAPLPKSRLAMKDVVRVL
Specific function: Involved in bioluminescence. It is a good supplier of reduced flavin mononucleotide (FMNH2) to the bioluminescence reaction. Major FMN reductase. It is capable of using both NADH and NADPH as electron donors. As electron acceptor, FMN is the most effectiv
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
Organism=Escherichia coli, GI1786792, Length=207, Percent_Identity=35.2657004830918, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 24510; Mature: 24379
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPIIADLQSRYTTKRYDASKRIPQADLDVIYQAMNLSASSINSQPWKFIVIESDEAKQ CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCEEEEEEECCHHHH RMHDTFANKFQFNQPHIKSASHIVLFAHNPKYTREDYAKVIDKGIADGRMGVEDREQAFG HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCC AFAFVELNTDESGNNAAWTKSQAYLALGNTLHTLARLGIDSTTMEGVDNELIGEIFKEEL EEEEEEECCCCCCCCCCEECCCEEEEHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH GGYQCDVALAMGYHDSEEDYNAPLPKSRLAMKDVVRVL CCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure THPIIADLQSRYTTKRYDASKRIPQADLDVIYQAMNLSASSINSQPWKFIVIESDEAKQ CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCEEEEEEECCHHHH RMHDTFANKFQFNQPHIKSASHIVLFAHNPKYTREDYAKVIDKGIADGRMGVEDREQAFG HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCC AFAFVELNTDESGNNAAWTKSQAYLALGNTLHTLARLGIDSTTMEGVDNELIGEIFKEEL EEEEEEECCCCCCCCCCEECCCEEEEHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH GGYQCDVALAMGYHDSEEDYNAPLPKSRLAMKDVVRVL CCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H; 6,7-Dihydropteridine [C]
Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8206830; 8033996; 9654450 [H]