Click here to switch to the map view.

The map label for this gene is vdlD [H]

Identifier: 157962311

GI number: 157962311

Start: 3036694

End: 3037194

Strand: Reverse

Name: vdlD [H]

Synonym: Spea_2490

Alternate gene names: 157962311

Gene position: 3037194-3036694 (Counterclockwise)

Preceding gene: 157962312

Following gene: 157962310

Centisome position: 58.69

GC content: 47.11

Gene sequence:

>501_bases
ATGGCCGGTTTAGAAAGACAGTTAACACTGAGGTTCTTAGCAGAACCTGCAGATGTAAACTTTGGCGGTAAAGTACACGG
CGGCGCCGTGATGAAATGGATTGACCTTGCGGGTTATGCTTGCGCTGCGGGCTGGAGTGGCAAGTATTGTATTACTGCTT
ATGCAGGCGGCATTCGTTTTGTTAAACCAATTCATGTAGGCAATATCGTTGAGGTTACGGCTAAAGTCATTTACACAGGC
AGAACTTCGATGCATTTAGGTGTTGATGTGAAAGCGGGCGACCCTAAGTTTCAAGATCGGCATCTAACTACCCATTGTGT
GTTAGTGATGGTTGCTGTTGATGATGATGGTCAACCCACGGAAGTCCCTGATTGGAAGCCTGTACTACCAGCCGATATTG
AGCTTAGAGAATCAGCTATTCGCCTGATGGATATGCGCAAAAAGATTGGCGCAGAGATGCAGGCGCATGTGGATCTGCAA
CCGTCTTTGCAAGATTCCTAA

Upstream 100 bases:

>100_bases
TAAGTGGTAGCTTTTTAGTCGGTCAGTTTGGCTAAAAGGTGCTGATGTAAAGAATTTGGCGTAAGATACTCAATAGTCAG
TAAATGCATTGAGGTCCAAT

Downstream 100 bases:

>100_bases
TGTGAGTTGTAAAATCATTAATGAAAGCTAGCCTTTGGGCTGGCTTTTTTATTGCCTGTTTTTTCTGTTTTATTTATGGA
CTAGCCTTTAGAATGAGTAA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAGLERQLTLRFLAEPADVNFGGKVHGGAVMKWIDLAGYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVTAKVIYTG
RTSMHLGVDVKAGDPKFQDRHLTTHCVLVMVAVDDDGQPTEVPDWKPVLPADIELRESAIRLMDMRKKIGAEMQAHVDLQ
PSLQDS

Sequences:

>Translated_166_residues
MAGLERQLTLRFLAEPADVNFGGKVHGGAVMKWIDLAGYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVTAKVIYTG
RTSMHLGVDVKAGDPKFQDRHLTTHCVLVMVAVDDDGQPTEVPDWKPVLPADIELRESAIRLMDMRKKIGAEMQAHVDLQ
PSLQDS
>Mature_165_residues
AGLERQLTLRFLAEPADVNFGGKVHGGAVMKWIDLAGYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVTAKVIYTGR
TSMHLGVDVKAGDPKFQDRHLTTHCVLVMVAVDDDGQPTEVPDWKPVLPADIELRESAIRLMDMRKKIGAEMQAHVDLQP
SLQDS

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=119, Percent_Identity=31.9327731092437, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18114; Mature: 17983

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLERQLTLRFLAEPADVNFGGKVHGGAVMKWIDLAGYACAAGWSGKYCITAYAGGIRF
CCCCCHHEEEEEECCCCCCCCCCEECCCHHHHHHHHCCEEEECCCCCCEEEEEEECCEEE
VKPIHVGNIVEVTAKVIYTGRTSMHLGVDVKAGDPKFQDRHLTTHCVLVMVAVDDDGQPT
EEEECCCCHHEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCC
EVPDWKPVLPADIELRESAIRLMDMRKKIGAEMQAHVDLQPSLQDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
AGLERQLTLRFLAEPADVNFGGKVHGGAVMKWIDLAGYACAAGWSGKYCITAYAGGIRF
CCCCHHEEEEEECCCCCCCCCCEECCCHHHHHHHHCCEEEECCCCCCEEEEEEECCEEE
VKPIHVGNIVEVTAKVIYTGRTSMHLGVDVKAGDPKFQDRHLTTHCVLVMVAVDDDGQPT
EEEECCCCHHEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCC
EVPDWKPVLPADIELRESAIRLMDMRKKIGAEMQAHVDLQPSLQDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]