Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962297
Identifier: 157962297
GI number: 157962297
Start: 3021310
End: 3021885
Strand: Reverse
Name: 157962297
Synonym: Spea_2476
Alternate gene names: NA
Gene position: 3021885-3021310 (Counterclockwise)
Preceding gene: 157962298
Following gene: 157962296
Centisome position: 58.4
GC content: 43.06
Gene sequence:
>576_bases ATGAAAAGTATAATCATAGGCCTATTATTGCTGCCTTTGTCGCTGGTAGCTTCAGCAGGGACCTGGACTGTAGAAAATGA CAGCTCCAATGTAAGCTTTATATCCATTAAAAAGGGAGATATTGCTGAGGTTCATCATTTTAACTCTGTTGCAGGAACCT TGAATGATAAAGGGCAGTTTGATTTTTCAATCGCCTTGGCAAGTGTGGCAACAAATATCGACATTCGTGATGAGCGTATG GACTCTCTGCTATTTGAAGTGGATAAGTATCCGAAACTGACTCTAAAGGCTAAGGTCGACCCTAAGTTACTTGCAAACTT AGCGATAGGTTCGGTGACGGTAGCAACTGTTGATGCCGAAGTAGCCTTACATGGCAAGAAGCAAAAAATGGCTTTTACGG TAAGTATCGCAAAGCTATCTGACTCTCACATGCTTGTTGCAAGCGTGGCACCTATCATAGTGAATGCTGATAGTTTCGGT ATGACTGCAGGCGTAGAGAAGCTGCGTGAAGTCGCTGGTTTATCGGCAATCAGTAAAGCGGTACCAGTCTCTTTTATGCT GAACCTAAAGCAATAG
Upstream 100 bases:
>100_bases AGCTAGTGGTTTAAAAATTAGCACTTGTGAATAGAAAATTGTTGAATTAGATTAAGCTTAACTATCAAGGTGGAAAACTA AATTTCGAGAGGAAGTGAAA
Downstream 100 bases:
>100_bases CAATAAAACACGTCTAAGCTGAGTAAATTGAGGGCTGTATAGTTATTTTAATGAGTGATTCAGCCTTTTTTTGTGCTTGT TGCCTAACGCTTTGTGTCCA
Product: YceI family protein
Products: NA
Alternate protein names: YceI Like Family; YceI Like Family Protein; YceI-Like Family Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKSIIIGLLLLPLSLVASAGTWTVENDSSNVSFISIKKGDIAEVHHFNSVAGTLNDKGQFDFSIALASVATNIDIRDERM DSLLFEVDKYPKLTLKAKVDPKLLANLAIGSVTVATVDAEVALHGKKQKMAFTVSIAKLSDSHMLVASVAPIIVNADSFG MTAGVEKLREVAGLSAISKAVPVSFMLNLKQ
Sequences:
>Translated_191_residues MKSIIIGLLLLPLSLVASAGTWTVENDSSNVSFISIKKGDIAEVHHFNSVAGTLNDKGQFDFSIALASVATNIDIRDERM DSLLFEVDKYPKLTLKAKVDPKLLANLAIGSVTVATVDAEVALHGKKQKMAFTVSIAKLSDSHMLVASVAPIIVNADSFG MTAGVEKLREVAGLSAISKAVPVSFMLNLKQ >Mature_191_residues MKSIIIGLLLLPLSLVASAGTWTVENDSSNVSFISIKKGDIAEVHHFNSVAGTLNDKGQFDFSIALASVATNIDIRDERM DSLLFEVDKYPKLTLKAKVDPKLLANLAIGSVTVATVDAEVALHGKKQKMAFTVSIAKLSDSHMLVASVAPIIVNADSFG MTAGVEKLREVAGLSAISKAVPVSFMLNLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20310; Mature: 20310
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIIGLLLLPLSLVASAGTWTVENDSSNVSFISIKKGDIAEVHHFNSVAGTLNDKGQF CCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCE DFSIALASVATNIDIRDERMDSLLFEVDKYPKLTLKAKVDPKLLANLAIGSVTVATVDAE EEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCEEEEEEEEEE VALHGKKQKMAFTVSIAKLSDSHMLVASVAPIIVNADSFGMTAGVEKLREVAGLSAISKA EEECCCCCEEEEEEEEEEECCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VPVSFMLNLKQ CCEEEEEEECC >Mature Secondary Structure MKSIIIGLLLLPLSLVASAGTWTVENDSSNVSFISIKKGDIAEVHHFNSVAGTLNDKGQF CCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCE DFSIALASVATNIDIRDERMDSLLFEVDKYPKLTLKAKVDPKLLANLAIGSVTVATVDAE EEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCEEEEEEEEEE VALHGKKQKMAFTVSIAKLSDSHMLVASVAPIIVNADSFGMTAGVEKLREVAGLSAISKA EEECCCCCEEEEEEEEEEECCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VPVSFMLNLKQ CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA