Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962286
Identifier: 157962286
GI number: 157962286
Start: 3008289
End: 3008687
Strand: Direct
Name: 157962286
Synonym: Spea_2465
Alternate gene names: NA
Gene position: 3008289-3008687 (Clockwise)
Preceding gene: 157962285
Following gene: 157962287
Centisome position: 58.14
GC content: 41.6
Gene sequence:
>399_bases ATGACTACACCAATACCAGCCCGCGTTAAGCGAACACAGCGAGATTATTCGTTAGGCTTTAAATTACAAGTTGTAGCTGC CGTAGAAAAAGGCGATATGACTTATAAACAAGCTCAAACAACCTATGGCATCCAAGGTCGCTCCACGGTACTTACTTGGC TTAGAAAGCACGGTAAGATGGACTGGACTCAACCAGTGAGAATGACTATGCCAAAAACAACTAAAGCTAAAGAAACCCCA GCTCAAAAGATTAAGCGCCTTGAAAAAGAGCTGGAAGATGAGCACTTACGTAATCTATTACTCAATGAAGCCGTTGATAT TATTGATGCAGAATATGGAGCTGGCCTTAGAAAAAAGTACTTAGCCAGGGAGCGAGAAGTCTTCAAAAACAGAAAGTAA
Upstream 100 bases:
>100_bases ATGAGAAGACAATTGTAATAAAAAAGCCGCAATATCAATTGCGGCTTTTTTATTAATCATGTCTTGTCCTGAAATGTGTT TACACATTTAGGACTTTATA
Downstream 100 bases:
>100_bases CGAGCTTAAATCGCGCTTGTAAGCTTCTGGGTATAACAAGACAAGCTATCTATCAAAGAGAACGAAGAGCGAATTGTAGA GCAATGGAGTTAGCCCCTGT
Product: transposase
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETP AQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK
Sequences:
>Translated_132_residues MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETP AQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK >Mature_131_residues TTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETPA QKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15378; Mature: 15247
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKM CCCCCCHHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC DWTQPVRMTMPKTTKAKETPAQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKY CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHH LAREREVFKNRK HHHHHHHHCCCC >Mature Secondary Structure TTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKM CCCCCHHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC DWTQPVRMTMPKTTKAKETPAQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKY CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHH LAREREVFKNRK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA