Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962286

Identifier: 157962286

GI number: 157962286

Start: 3008289

End: 3008687

Strand: Direct

Name: 157962286

Synonym: Spea_2465

Alternate gene names: NA

Gene position: 3008289-3008687 (Clockwise)

Preceding gene: 157962285

Following gene: 157962287

Centisome position: 58.14

GC content: 41.6

Gene sequence:

>399_bases
ATGACTACACCAATACCAGCCCGCGTTAAGCGAACACAGCGAGATTATTCGTTAGGCTTTAAATTACAAGTTGTAGCTGC
CGTAGAAAAAGGCGATATGACTTATAAACAAGCTCAAACAACCTATGGCATCCAAGGTCGCTCCACGGTACTTACTTGGC
TTAGAAAGCACGGTAAGATGGACTGGACTCAACCAGTGAGAATGACTATGCCAAAAACAACTAAAGCTAAAGAAACCCCA
GCTCAAAAGATTAAGCGCCTTGAAAAAGAGCTGGAAGATGAGCACTTACGTAATCTATTACTCAATGAAGCCGTTGATAT
TATTGATGCAGAATATGGAGCTGGCCTTAGAAAAAAGTACTTAGCCAGGGAGCGAGAAGTCTTCAAAAACAGAAAGTAA

Upstream 100 bases:

>100_bases
ATGAGAAGACAATTGTAATAAAAAAGCCGCAATATCAATTGCGGCTTTTTTATTAATCATGTCTTGTCCTGAAATGTGTT
TACACATTTAGGACTTTATA

Downstream 100 bases:

>100_bases
CGAGCTTAAATCGCGCTTGTAAGCTTCTGGGTATAACAAGACAAGCTATCTATCAAAGAGAACGAAGAGCGAATTGTAGA
GCAATGGAGTTAGCCCCTGT

Product: transposase

Products: NA

Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETP
AQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK

Sequences:

>Translated_132_residues
MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETP
AQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK
>Mature_131_residues
TTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKMDWTQPVRMTMPKTTKAKETPA
QKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKYLAREREVFKNRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15378; Mature: 15247

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKM
CCCCCCHHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC
DWTQPVRMTMPKTTKAKETPAQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKY
CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHH
LAREREVFKNRK
HHHHHHHHCCCC
>Mature Secondary Structure 
TTPIPARVKRTQRDYSLGFKLQVVAAVEKGDMTYKQAQTTYGIQGRSTVLTWLRKHGKM
CCCCCHHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC
DWTQPVRMTMPKTTKAKETPAQKIKRLEKELEDEHLRNLLLNEAVDIIDAEYGAGLRKKY
CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHH
LAREREVFKNRK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA