Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962275
Identifier: 157962275
GI number: 157962275
Start: 2996567
End: 2996992
Strand: Direct
Name: 157962275
Synonym: Spea_2454
Alternate gene names: NA
Gene position: 2996567-2996992 (Clockwise)
Preceding gene: 157962267
Following gene: 157962277
Centisome position: 57.91
GC content: 38.73
Gene sequence:
>426_bases ATGCGACAGATCAACATAGATTGGTTGCGTTTGTTTCGTTACTCACTATTGTTCATCTTCTTTTCTATGTTGATGACCGT CTTTATGCTGATCTGGCTTTCTAATAGTCTAGAAGAAGCTTGGCAGAAAGGACTGATGTTAACCTTTTCAGAATTTGAAA TGACCGTTGAACTGACACTAACACTGCTCATATACATTAGCTTTCCAGTACTACTATTTCGCTTCCTGTATTATTTTTCC AAGATGCTCTATCGTGGACGAAATCCAGGGGTCGCAATCATTAGCTACAAAACACTATTTAACCCATTAAACTTTCTACT GTTTCCAAGCTTACTCAATCCACAAGGACTAACTTATCGGCGACGCTGTTTAATGGCGCTCATCTTACTGAGTGCCATCT ACTTGACCATTTTGTTGATCACTTAA
Upstream 100 bases:
>100_bases TAATTACTCATAAAGTACGCCAAAACAGAAAATTTACTCTAAATTTAATTAAGAGATTTGCTCATGACTTTAAGAGCAAA GGCAAGGCTTGGGAGGTTGA
Downstream 100 bases:
>100_bases TACGCTCTAAAAACGCTGTCGCCTTATCTAAGTCTCGAGTTCTCGACATCGGAGGTAAAGAGTTTAAAAAAGCCTGTCCG TAAGGCTTATTAACGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRQINIDWLRLFRYSLLFIFFSMLMTVFMLIWLSNSLEEAWQKGLMLTFSEFEMTVELTLTLLIYISFPVLLFRFLYYFS KMLYRGRNPGVAIISYKTLFNPLNFLLFPSLLNPQGLTYRRRCLMALILLSAIYLTILLIT
Sequences:
>Translated_141_residues MRQINIDWLRLFRYSLLFIFFSMLMTVFMLIWLSNSLEEAWQKGLMLTFSEFEMTVELTLTLLIYISFPVLLFRFLYYFS KMLYRGRNPGVAIISYKTLFNPLNFLLFPSLLNPQGLTYRRRCLMALILLSAIYLTILLIT >Mature_141_residues MRQINIDWLRLFRYSLLFIFFSMLMTVFMLIWLSNSLEEAWQKGLMLTFSEFEMTVELTLTLLIYISFPVLLFRFLYYFS KMLYRGRNPGVAIISYKTLFNPLNFLLFPSLLNPQGLTYRRRCLMALILLSAIYLTILLIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16870; Mature: 16870
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQINIDWLRLFRYSLLFIFFSMLMTVFMLIWLSNSLEEAWQKGLMLTFSEFEMTVELTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH TLLIYISFPVLLFRFLYYFSKMLYRGRNPGVAIISYKTLFNPLNFLLFPSLLNPQGLTYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHH RRCLMALILLSAIYLTILLIT HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRQINIDWLRLFRYSLLFIFFSMLMTVFMLIWLSNSLEEAWQKGLMLTFSEFEMTVELTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH TLLIYISFPVLLFRFLYYFSKMLYRGRNPGVAIISYKTLFNPLNFLLFPSLLNPQGLTYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHH RRCLMALILLSAIYLTILLIT HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA