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The map label for this gene is ytfM [H]

Identifier: 157962257

GI number: 157962257

Start: 2976381

End: 2978207

Strand: Direct

Name: ytfM [H]

Synonym: Spea_2436

Alternate gene names: 157962257

Gene position: 2976381-2978207 (Clockwise)

Preceding gene: 157962243

Following gene: 157962258

Centisome position: 57.52

GC content: 43.84

Gene sequence:

>1827_bases
GTGCTGACCATAACTTTTCTGCTTGTCAGTGTTATATGCGTGACATTTTCCGTTCGAGCCAATGACTGGTTAACACTCAA
AATTAATGGCGTTGAAGGTAGTCTCGAACGTAACGTAAAGGCTCACCTTGGTGCTCTACCCGAATCGAGTGTGCAACGCC
GTGCTTTTATCTTTAATGCCGAAGACAACATAGAGGCCGCGATGCATTCTATGGGCTATTATCACAGCCGTGTTTCTCAA
AATGTTATTAATAATGAAAAACGTGCTTGGGTGTTAAATCTAGACATAGATGCAGGTAAGCCCACGCTTATCAGCTGGGT
TGATATTCAGGTCAAAGGTGAGATGCGTAATGATCCGATCTTTGAAAAATGGCTCAGCCAATTAAAAGTCAGGCCAGGCG
ACAGACTCAATCACGGTGTTTATGAAGATGTGAAAGCGCAACTGCTAACACTGGCACTGGCACGTGGTTATTTTGATGGT
AAGTTTGATCAAGCTGAAATTGCGGTAAATCGCGACTTTAACACCGCAAAAATCTCGCTCTACTATGACTCTGGTAAACG
CTACCACATAGGAAAAGTCAGCTTTACTGGATCTAACTTAGAGCCACAAATTTTAGAAGAGCTGGTCCCATTTAAATATG
ATGCGCCCTACAGCACAGGTAACCTAGCCCAGTTAAACAGGCAACTATTAGATACTGGTTACTTTTCCAATATTAAGGTA
CTACCTTTAGTCGATCAGGTTGAGGGAATACAAGTGCCCGTACGAGTTGAACTGAGCCCTAGACCTAACCACTCTATCGA
ACTGGGTTTAGGTGCCGATATCGGGAATACTGTAGATAACAGTCTTGAACCTCGTGTGCGAGTAACTTGGCGTACTCCAC
AAATCAATAAATATGGCCACTCTCAAGAGACCACTGCAGAGTGGGCTCCAGATAAACCAAAATTTTTAACCACTTATACA
ATCCCCCTGACCCATCCACTCGATGACCAATTGAAAATACGTATGGGTATGCTAAGAGATAAATATGGCGTGACTCAGGT
TTATAACAGCGAAGACCGTGACTTTAAAAATACTGGCCAGCTCGAATCATCTAAGATGTTATTTGCTGTCATCAGACAAC
AGCGGCTTCAGAGTAAGTGGTTATTCAATTATTCGGCTGAGATCATGCGGGAGAACTATACCCAATCGGGTGTCGATTAC
GACCCAAGATTTGTATTATTTGGTACAAGCCTATCTAAAACCACTCGTGGCGATAACTCTCTGGATCCAAAATCTGGCTT
CTTTCAGTTCTATAGCCTCGAGTATGCAGACCCAAGTCTTGGCTCAGAGGTTAGACTCGCCCGATTACAAACCAAGTTTA
AGTGGATTAATACCTTTTTTGATAAACATAGAATCGTTTCGAGACTCGATATGGCCGCAAATCTCACAAGTGAAGGTTCA
CTTGCGAATATTCCTCCCTCTTTACGTTACTTTGCCGGTGGTGATCAGAGTATTCGTGGTTATAGCTATAACGAACTCGG
TCCCTCTATCGACTCGGTCAATGACGAGGGTGAGATTATTCGAGAAGTCGTTGGTGGCCGCTATTTAATGGTAGGTAGCC
TAGAATACCAATACTATGTCACCCCTACTTGGCGAGTCGCTACGTTTGTTGACGCGGGTAATGCTTTTGATGTTAATCAA
ATTGAGCTGGTGACCTCAGTGGGTGCTGGTATCCATTGGATCTCCCCCATAGGTCCAGTCAAACTAGATGTCGGTATTGG
ACTTAATGAAACCGATACTATCAGTCGCCCTTGGCGCATTCATATCACCATGGGAGCCGAACTATGA

Upstream 100 bases:

>100_bases
ACAATCAGCAACTTGCTTGAGTTAACGATTCTAGTGACAATAGCTTGTCTCAATTAAACTAATGATAAGAGTCTAATTTT
TGTTAATAAGTTTGCTTCGT

Downstream 100 bases:

>100_bases
CAGCTTCCAATACACAACCGAGTAATGAAACCAAAACCGCAAAGAACCCCACTAAAACAAAATCTTGGTATATGCGACTT
TGGGGCTGGTTTAAACTCTT

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MLTITFLLVSVICVTFSVRANDWLTLKINGVEGSLERNVKAHLGALPESSVQRRAFIFNAEDNIEAAMHSMGYYHSRVSQ
NVINNEKRAWVLNLDIDAGKPTLISWVDIQVKGEMRNDPIFEKWLSQLKVRPGDRLNHGVYEDVKAQLLTLALARGYFDG
KFDQAEIAVNRDFNTAKISLYYDSGKRYHIGKVSFTGSNLEPQILEELVPFKYDAPYSTGNLAQLNRQLLDTGYFSNIKV
LPLVDQVEGIQVPVRVELSPRPNHSIELGLGADIGNTVDNSLEPRVRVTWRTPQINKYGHSQETTAEWAPDKPKFLTTYT
IPLTHPLDDQLKIRMGMLRDKYGVTQVYNSEDRDFKNTGQLESSKMLFAVIRQQRLQSKWLFNYSAEIMRENYTQSGVDY
DPRFVLFGTSLSKTTRGDNSLDPKSGFFQFYSLEYADPSLGSEVRLARLQTKFKWINTFFDKHRIVSRLDMAANLTSEGS
LANIPPSLRYFAGGDQSIRGYSYNELGPSIDSVNDEGEIIREVVGGRYLMVGSLEYQYYVTPTWRVATFVDAGNAFDVNQ
IELVTSVGAGIHWISPIGPVKLDVGIGLNETDTISRPWRIHITMGAEL

Sequences:

>Translated_608_residues
MLTITFLLVSVICVTFSVRANDWLTLKINGVEGSLERNVKAHLGALPESSVQRRAFIFNAEDNIEAAMHSMGYYHSRVSQ
NVINNEKRAWVLNLDIDAGKPTLISWVDIQVKGEMRNDPIFEKWLSQLKVRPGDRLNHGVYEDVKAQLLTLALARGYFDG
KFDQAEIAVNRDFNTAKISLYYDSGKRYHIGKVSFTGSNLEPQILEELVPFKYDAPYSTGNLAQLNRQLLDTGYFSNIKV
LPLVDQVEGIQVPVRVELSPRPNHSIELGLGADIGNTVDNSLEPRVRVTWRTPQINKYGHSQETTAEWAPDKPKFLTTYT
IPLTHPLDDQLKIRMGMLRDKYGVTQVYNSEDRDFKNTGQLESSKMLFAVIRQQRLQSKWLFNYSAEIMRENYTQSGVDY
DPRFVLFGTSLSKTTRGDNSLDPKSGFFQFYSLEYADPSLGSEVRLARLQTKFKWINTFFDKHRIVSRLDMAANLTSEGS
LANIPPSLRYFAGGDQSIRGYSYNELGPSIDSVNDEGEIIREVVGGRYLMVGSLEYQYYVTPTWRVATFVDAGNAFDVNQ
IELVTSVGAGIHWISPIGPVKLDVGIGLNETDTISRPWRIHITMGAEL
>Mature_608_residues
MLTITFLLVSVICVTFSVRANDWLTLKINGVEGSLERNVKAHLGALPESSVQRRAFIFNAEDNIEAAMHSMGYYHSRVSQ
NVINNEKRAWVLNLDIDAGKPTLISWVDIQVKGEMRNDPIFEKWLSQLKVRPGDRLNHGVYEDVKAQLLTLALARGYFDG
KFDQAEIAVNRDFNTAKISLYYDSGKRYHIGKVSFTGSNLEPQILEELVPFKYDAPYSTGNLAQLNRQLLDTGYFSNIKV
LPLVDQVEGIQVPVRVELSPRPNHSIELGLGADIGNTVDNSLEPRVRVTWRTPQINKYGHSQETTAEWAPDKPKFLTTYT
IPLTHPLDDQLKIRMGMLRDKYGVTQVYNSEDRDFKNTGQLESSKMLFAVIRQQRLQSKWLFNYSAEIMRENYTQSGVDY
DPRFVLFGTSLSKTTRGDNSLDPKSGFFQFYSLEYADPSLGSEVRLARLQTKFKWINTFFDKHRIVSRLDMAANLTSEGS
LANIPPSLRYFAGGDQSIRGYSYNELGPSIDSVNDEGEIIREVVGGRYLMVGSLEYQYYVTPTWRVATFVDAGNAFDVNQ
IELVTSVGAGIHWISPIGPVKLDVGIGLNETDTISRPWRIHITMGAEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=612, Percent_Identity=32.3529411764706, Blast_Score=303, Evalue=2e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68762; Mature: 68762

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTITFLLVSVICVTFSVRANDWLTLKINGVEGSLERNVKAHLGALPESSVQRRAFIFNA
CEEHHHHHHHHHHHEEEEECCCEEEEEEECCCCCHHCCHHHHHCCCCCHHCCCEEEEECC
EDNIEAAMHSMGYYHSRVSQNVINNEKRAWVLNLDIDAGKPTLISWVDIQVKGEMRNDPI
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCH
FEKWLSQLKVRPGDRLNHGVYEDVKAQLLTLALARGYFDGKFDQAEIAVNRDFNTAKISL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE
YYDSGKRYHIGKVSFTGSNLEPQILEELVPFKYDAPYSTGNLAQLNRQLLDTGYFSNIKV
EEECCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
LPLVDQVEGIQVPVRVELSPRPNHSIELGLGADIGNTVDNSLEPRVRVTWRTPQINKYGH
EEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC
SQETTAEWAPDKPKFLTTYTIPLTHPLDDQLKIRMGMLRDKYGVTQVYNSEDRDFKNTGQ
CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
LESSKMLFAVIRQQRLQSKWLFNYSAEIMRENYTQSGVDYDPRFVLFGTSLSKTTRGDNS
CCHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
LDPKSGFFQFYSLEYADPSLGSEVRLARLQTKFKWINTFFDKHRIVSRLDMAANLTSEGS
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LANIPPSLRYFAGGDQSIRGYSYNELGPSIDSVNDEGEIIREVVGGRYLMVGSLEYQYYV
CCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEE
TPTWRVATFVDAGNAFDVNQIELVTSVGAGIHWISPIGPVKLDVGIGLNETDTISRPWRI
CCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEE
HITMGAEL
EEEECCCC
>Mature Secondary Structure
MLTITFLLVSVICVTFSVRANDWLTLKINGVEGSLERNVKAHLGALPESSVQRRAFIFNA
CEEHHHHHHHHHHHEEEEECCCEEEEEEECCCCCHHCCHHHHHCCCCCHHCCCEEEEECC
EDNIEAAMHSMGYYHSRVSQNVINNEKRAWVLNLDIDAGKPTLISWVDIQVKGEMRNDPI
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCH
FEKWLSQLKVRPGDRLNHGVYEDVKAQLLTLALARGYFDGKFDQAEIAVNRDFNTAKISL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE
YYDSGKRYHIGKVSFTGSNLEPQILEELVPFKYDAPYSTGNLAQLNRQLLDTGYFSNIKV
EEECCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
LPLVDQVEGIQVPVRVELSPRPNHSIELGLGADIGNTVDNSLEPRVRVTWRTPQINKYGH
EEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC
SQETTAEWAPDKPKFLTTYTIPLTHPLDDQLKIRMGMLRDKYGVTQVYNSEDRDFKNTGQ
CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
LESSKMLFAVIRQQRLQSKWLFNYSAEIMRENYTQSGVDYDPRFVLFGTSLSKTTRGDNS
CCHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
LDPKSGFFQFYSLEYADPSLGSEVRLARLQTKFKWINTFFDKHRIVSRLDMAANLTSEGS
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LANIPPSLRYFAGGDQSIRGYSYNELGPSIDSVNDEGEIIREVVGGRYLMVGSLEYQYYV
CCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEE
TPTWRVATFVDAGNAFDVNQIELVTSVGAGIHWISPIGPVKLDVGIGLNETDTISRPWRI
CCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEE
HITMGAEL
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]