Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962212
Identifier: 157962212
GI number: 157962212
Start: 2914046
End: 2914831
Strand: Direct
Name: 157962212
Synonym: Spea_2391
Alternate gene names: NA
Gene position: 2914046-2914831 (Clockwise)
Preceding gene: 157962211
Following gene: 157962214
Centisome position: 56.31
GC content: 45.8
Gene sequence:
>786_bases TTGCCTAGAAAGATACCGACTCTATTCGCTATTAGCCTGTTAGCAGCAAGCGGAACAACGCTTGCCGACACCACAGTGCT AACGCCCCATACTGCCGAGTATCAAGTTTATTACGGCAGCATAGAGCTTGGGCGTGCTCGCTATATTCTTGAGGCTCCAC AGGGCAATTTTTTTCAGTATCGTTTCGATAGCGATGTTGGACTATTAATGCTGTCCGACAAGCGTCACATCCTTAGCGAA TTTACCTTAGAAGATGCTAATCAGCTGGTGCCTATGCGCTACTCCGTCGAACGCACAGGTACAGGCCCGAGTTTTCGGGA GCAAGCCGCCTTTGCTAAAGGGCAGAATGTGGTTCACAGCCGCTATAAAGATGAGCGCGCTAAGTTCCCCTACGACAATC AACTATTTGATCCATTGATGGTCCAACTGCAATTTAGACTCGATATGCAAGCCCATAAAGATGAGCTGCATTACACCATG GTAAAAGAGGGAGAAGTCGATGACTACGCCTTTAAAATCGTGGGGAAGGAACGAGTTAATATAGAAAGTGGCAGTTATCA AACCGTCAAATTTGAAGTTGTACGTGATAGTAAAAAACGCCAAACCTTCTTTTGGATGGCGCCAGATCTCAGTTATCTGC CAATACGGTTAACCCATTTTGAAAAAGGCAGTAAGCAGCTGGATATCAAGCTTCTTAATTATCGTTTTGGACCGAGTGAT GAAAAGTTACAACCAACAACTGAGCAGGCGCTTGTCGATGATAAGGCTAGCAACGAGGAAGGCTGA
Upstream 100 bases:
>100_bases GAACCGTGGCAGAATTAAGCTGTCAGACTATGAATGGCAACCCGATATCGCAACGTTAGTGCTTTCCCTGCCATATTAGA AAGCAAATAAGGAGGTAAAT
Downstream 100 bases:
>100_bases CTTTACTAACCATAAACATGCCAATAAAAAAGCTCGCTAGGTTTAACCTTGCGAGCTTTTTATTTTCTAGCAATTATTTA GCTCTGTGATGAACTCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPRKIPTLFAISLLAASGTTLADTTVLTPHTAEYQVYYGSIELGRARYILEAPQGNFFQYRFDSDVGLLMLSDKRHILSE FTLEDANQLVPMRYSVERTGTGPSFREQAAFAKGQNVVHSRYKDERAKFPYDNQLFDPLMVQLQFRLDMQAHKDELHYTM VKEGEVDDYAFKIVGKERVNIESGSYQTVKFEVVRDSKKRQTFFWMAPDLSYLPIRLTHFEKGSKQLDIKLLNYRFGPSD EKLQPTTEQALVDDKASNEEG
Sequences:
>Translated_261_residues MPRKIPTLFAISLLAASGTTLADTTVLTPHTAEYQVYYGSIELGRARYILEAPQGNFFQYRFDSDVGLLMLSDKRHILSE FTLEDANQLVPMRYSVERTGTGPSFREQAAFAKGQNVVHSRYKDERAKFPYDNQLFDPLMVQLQFRLDMQAHKDELHYTM VKEGEVDDYAFKIVGKERVNIESGSYQTVKFEVVRDSKKRQTFFWMAPDLSYLPIRLTHFEKGSKQLDIKLLNYRFGPSD EKLQPTTEQALVDDKASNEEG >Mature_260_residues PRKIPTLFAISLLAASGTTLADTTVLTPHTAEYQVYYGSIELGRARYILEAPQGNFFQYRFDSDVGLLMLSDKRHILSEF TLEDANQLVPMRYSVERTGTGPSFREQAAFAKGQNVVHSRYKDERAKFPYDNQLFDPLMVQLQFRLDMQAHKDELHYTMV KEGEVDDYAFKIVGKERVNIESGSYQTVKFEVVRDSKKRQTFFWMAPDLSYLPIRLTHFEKGSKQLDIKLLNYRFGPSDE KLQPTTEQALVDDKASNEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30075; Mature: 29944
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKIPTLFAISLLAASGTTLADTTVLTPHTAEYQVYYGSIELGRARYILEAPQGNFFQY CCCCCHHHHHHHHHHCCCCEECCEEEECCCCCEEEEEEEEEEECCEEEEEECCCCCEEEE RFDSDVGLLMLSDKRHILSEFTLEDANQLVPMRYSVERTGTGPSFREQAAFAKGQNVVHS EECCCCEEEEECCCHHHHHHHCHHCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCHHHHH RYKDERAKFPYDNQLFDPLMVQLQFRLDMQAHKDELHYTMVKEGEVDDYAFKIVGKERVN HHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEE IESGSYQTVKFEVVRDSKKRQTFFWMAPDLSYLPIRLTHFEKGSKQLDIKLLNYRFGPSD ECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCC EKLQPTTEQALVDDKASNEEG CCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure PRKIPTLFAISLLAASGTTLADTTVLTPHTAEYQVYYGSIELGRARYILEAPQGNFFQY CCCCHHHHHHHHHHCCCCEECCEEEECCCCCEEEEEEEEEEECCEEEEEECCCCCEEEE RFDSDVGLLMLSDKRHILSEFTLEDANQLVPMRYSVERTGTGPSFREQAAFAKGQNVVHS EECCCCEEEEECCCHHHHHHHCHHCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCHHHHH RYKDERAKFPYDNQLFDPLMVQLQFRLDMQAHKDELHYTMVKEGEVDDYAFKIVGKERVN HHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEE IESGSYQTVKFEVVRDSKKRQTFFWMAPDLSYLPIRLTHFEKGSKQLDIKLLNYRFGPSD ECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCC EKLQPTTEQALVDDKASNEEG CCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA