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The map label for this gene is yjdL [C]

Identifier: 157962209

GI number: 157962209

Start: 2910896

End: 2912617

Strand: Direct

Name: yjdL [C]

Synonym: Spea_2388

Alternate gene names: 157962209

Gene position: 2910896-2912617 (Clockwise)

Preceding gene: 157962206

Following gene: 157962211

Centisome position: 56.25

GC content: 46.81

Gene sequence:

>1722_bases
ATGACTCAAGCAGGACGCACTGCGCTGCCCCCTACATTCTTTGTAGCCAATACCATGGAGATCTTTGAACGCCTTGCTTG
GTATGGCTTTTTTGCTCTCTCTTCGCTTTATATGACCTCACCACAAAATCAAGGCGGTCTAGGATTCTCCGAACAAGAGC
GTGGCTTATTGCAGGGGATGATCCCCTTCTTCCTCTATCTATTTCCTGTTCTAACAGGCGCCCTCGCCGACCGCTATGGC
TACCGCAAGATGTTCCTCGTTGCCTACGCCATCATGTGCCCAAGTTATTACTTATTAGGTCAAGTCGATACCTTTATGGG
CTTCTTTGTCGCCTTTATGGGCGTTGCGGTTGGTGCCGCCTGCTTTAAACCTGTCGTCACCGGCACGGTGGCACGAACCA
CAGATGATACTAACCGCGGCTTAGGCTTCGGGATCTTCTATATGATGGTCAATATCGGCGGTTTCTTGGGCCCATTTATC
GCAGGTTATGTTAGAGCGATAAGCTGGGACTGGGTATTTATCATGTCAGCCTTCTGGATTGCGGTTAACTTCATCCCAGC
TTACTTCTTCTATAAAGAACCAACGGATCAGAGCCAACAGAAAGGAAAGCCTCTAAAAGCGGTATTCCAAGATATCCAGC
AAGTATTAGGTAACGCACGCTTTGCTATTTTGTTCTTTGGTACCTTAATCATCTTAATGTCTTACGGTGCTAAATGGATC
ACGGGGGAAACCACATTAATCATCTACGCCGTTTGGTTTACATCTCATATCATCTGGGACAAATTAGCCTCATCTAGCAA
GCAGGCCCCTTGGTATGCACAAAAGATAAGTCTAGGTAATAAACCCTTCGTTATTTACCTACTGATCCTCTCTGGTATGT
GGATGGTCTACCAGCAGATTTTTATTACCTTGCCTATTTATATTCGTGACTTTGTCGATACCTCAGATCTCGTCTTGATG
CTTGCAGGCTATCCTGATCTGCAGCAGTTTTTTGCTCCTGTCGATTTAAGTCTATTGCAATCAGAAATGACCCGGTTAAG
CCACGAAGTCGCTGCTGGTACGCTAAATGTACAACAAGCTTACTTTGAATTGGTGCACACTAAGGTGATGGTGCCAACGG
CAGAAATAAGCCAAGGCTTTGCTGCTATAACCCAAACACCAACAGCCGCAGCTCAGTATGCCCAAACATGGGCAAGCGAG
TATCGCCAAGTTAATCCTGAGTACCTTATCGGACTTAACTTCCTATCAATTGTGGTAATGCAGTTGATGATTAGCCGCTT
CGTTGAACGCTTCCAAGCCCTGCCAGTACTTGTTGGCGGCACAATTATTCTTGCCATCGGCACTGCCATTGGCGGTATTG
CCCATGGCGCAATCATGGGCGGAGCCATGGTACTGACCTCAATTTTGGTATTCTCAATCGGTGAAATGGTGGCCTCACCT
AAGAGCCAAGAATATGTCGCAAGCTTTGCGCCTAATGATAAAAAAGCCATGTTTATGGGCTACTACTTCGTCTCTTCGGC
GATAGGCTTCTTACTAGCCGGCCCTCTATCTGGTTACCTCTATGCAGAAGTAGCCAAAGGTGCAGGTCGTCCAGATATGA
TGTGGTACATCATTGGTGGCTTTGGTCTATTAACCGCGTTTGGTCTGGTTATGTTCCACAAATTTGGTACCACGCCACAA
GCGGATGACGATACCGATGTGACACTTGCTCAAGCAAGCTAA

Upstream 100 bases:

>100_bases
ATCTACTGAACCAACCAGCTTCTATTTTGCACAATAACCTCCACTTTTTTGCAACATGTGGTAGCATGACTCAAAATGTA
TAAAATATACGGATAATAAT

Downstream 100 bases:

>100_bases
GCACAAAATAGACTTGTGGGAGGTAATCCTAGTCTATTGAAATAGGTCTATTGATAATAGGCCCCTTAAAACCAGACGTA
GAAAATAGCCCGCGTAAGTA

Product: major facilitator transporter

Products: NA

Alternate protein names: Amino Acid/Peptide Transporter; Dipeptide/Tripeptide Permease; Transport-Related Membrane Protein; Permease; Peptide/Proton Symporter Family Protein; Proton-Dependent Peptide Transporter; Peptide Transporter

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSEQERGLLQGMIPFFLYLFPVLTGALADRYG
YRKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFI
AGYVRAISWDWVFIMSAFWIAVNFIPAYFFYKEPTDQSQQKGKPLKAVFQDIQQVLGNARFAILFFGTLIILMSYGAKWI
TGETTLIIYAVWFTSHIIWDKLASSSKQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLM
LAGYPDLQQFFAPVDLSLLQSEMTRLSHEVAAGTLNVQQAYFELVHTKVMVPTAEISQGFAAITQTPTAAAQYAQTWASE
YRQVNPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILAIGTAIGGIAHGAIMGGAMVLTSILVFSIGEMVASP
KSQEYVASFAPNDKKAMFMGYYFVSSAIGFLLAGPLSGYLYAEVAKGAGRPDMMWYIIGGFGLLTAFGLVMFHKFGTTPQ
ADDDTDVTLAQAS

Sequences:

>Translated_573_residues
MTQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSEQERGLLQGMIPFFLYLFPVLTGALADRYG
YRKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFI
AGYVRAISWDWVFIMSAFWIAVNFIPAYFFYKEPTDQSQQKGKPLKAVFQDIQQVLGNARFAILFFGTLIILMSYGAKWI
TGETTLIIYAVWFTSHIIWDKLASSSKQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLM
LAGYPDLQQFFAPVDLSLLQSEMTRLSHEVAAGTLNVQQAYFELVHTKVMVPTAEISQGFAAITQTPTAAAQYAQTWASE
YRQVNPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILAIGTAIGGIAHGAIMGGAMVLTSILVFSIGEMVASP
KSQEYVASFAPNDKKAMFMGYYFVSSAIGFLLAGPLSGYLYAEVAKGAGRPDMMWYIIGGFGLLTAFGLVMFHKFGTTPQ
ADDDTDVTLAQAS
>Mature_572_residues
TQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSEQERGLLQGMIPFFLYLFPVLTGALADRYGY
RKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFIA
GYVRAISWDWVFIMSAFWIAVNFIPAYFFYKEPTDQSQQKGKPLKAVFQDIQQVLGNARFAILFFGTLIILMSYGAKWIT
GETTLIIYAVWFTSHIIWDKLASSSKQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLML
AGYPDLQQFFAPVDLSLLQSEMTRLSHEVAAGTLNVQQAYFELVHTKVMVPTAEISQGFAAITQTPTAAAQYAQTWASEY
RQVNPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILAIGTAIGGIAHGAIMGGAMVLTSILVFSIGEMVASPK
SQEYVASFAPNDKKAMFMGYYFVSSAIGFLLAGPLSGYLYAEVAKGAGRPDMMWYIIGGFGLLTAFGLVMFHKFGTTPQA
DDDTDVTLAQAS

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63355; Mature: 63224

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSEQERGLLQGM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH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HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA