Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962125
Identifier: 157962125
GI number: 157962125
Start: 2798257
End: 2799402
Strand: Direct
Name: 157962125
Synonym: Spea_2304
Alternate gene names: NA
Gene position: 2798257-2799402 (Clockwise)
Preceding gene: 157962124
Following gene: 157962126
Centisome position: 54.08
GC content: 38.39
Gene sequence:
>1146_bases ATGTTACCGCTACCGTCCAGTAATAAACTCGATATTCCTGCATTAAGCCGAATATTCGACAATACAACCAACTCCTACAA GCTACTTTTCTTTCGTGCTTTACTTAGCTTGATTCAGGATGGGAAAACGCCGGACGGAAAAGTTAACAGCACTGAACTGG CGCAATACTTATTAGCTCACGCTTGGGTACCATCAGTCTATTTTAAATTAAACCTCGGCACTCAAGATCAAATTGTTCAA CACCTCTACGACCTAAATTTAGTAGCAGTCGACCTGTCACAGCATAAAGGTAAGCCCTTTACACTATTGTTCGAAAAGTT AGCCAAAACTAACAACTCTAAGATTAACAAACAAGTTTTAAAGTATGTGCCATACCGTTTACTTCAACCCTTCTTTAGTG CCGAATTACAAGGCATAAAGGATGCCGAAAAAAATAACCTAACGTATGAACTATCACAAAGTCAGTTCGACATTGTTAAA CCTATTTACAAAATTTCCTTTATTGAAGATTGTAATTTACCCCAATTAACATTACACCCAGACTGGTATGAGTACTTATG CAATAACATCATTTTAGTACAAGGTTGGGCCGAGCTAAATTGGACTCGTTACTTACAGCGAAAAAACCCAAACACGCCTT CGATAAGCAATAAACTGACGTTGAATACTAAACGTGAATCATTAGTTAAGCAGCGGAAATTTTGGGATGAATTTATCTCG CAACATCAACCCAAATGCATTTTTACCGGAGAGCAACTTAGCACTGCCAATTACGAATTAGACCATTTTGTACCTTGGTC CTATGTTGCCCATAATCAGTTTTGGAACCTCTTGCCTATATTAAACAGCTGTAACTCGTCTAAAAGTAACAAACTACCAG ACAAATGCTTTTTACAGGACTTTACAAAGCTACATTTTGAAGCTGTTACTATGGCAATAAAGCACCGACGTATTGACATC ATTGATGACTATATAACCATCCTTCAGTGCCCAAAAAGCGAATTAACTGACAAACTGAAATTCACTGGCAAGCTGAGCCA CGTATTACAAACAGTACTGGACTCTGCAGGCTTACAAGGGTTTGAGCCAAACTGGAAGTGGACTAAATCAGAGTCAAACC AACACTGTATACCTAACCAGTTATAA
Upstream 100 bases:
>100_bases TGTGAGTTTGACTCAAAGCTATTAATGTTAAACAAAAAAATCATTGGATTTACCATTAAATCTGTAACATGATGCAACTT TAATTGTTAATGAGTTTCTC
Downstream 100 bases:
>100_bases ATTGTAATTCATTATCCTAATTCCTCCGTGCATTGCATCTAATAATCATCTAGAATATTCACCCTCCTCGTTATACCTAT AACGTCTTACTATATGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLPLPSSNKLDIPALSRIFDNTTNSYKLLFFRALLSLIQDGKTPDGKVNSTELAQYLLAHAWVPSVYFKLNLGTQDQIVQ HLYDLNLVAVDLSQHKGKPFTLLFEKLAKTNNSKINKQVLKYVPYRLLQPFFSAELQGIKDAEKNNLTYELSQSQFDIVK PIYKISFIEDCNLPQLTLHPDWYEYLCNNIILVQGWAELNWTRYLQRKNPNTPSISNKLTLNTKRESLVKQRKFWDEFIS QHQPKCIFTGEQLSTANYELDHFVPWSYVAHNQFWNLLPILNSCNSSKSNKLPDKCFLQDFTKLHFEAVTMAIKHRRIDI IDDYITILQCPKSELTDKLKFTGKLSHVLQTVLDSAGLQGFEPNWKWTKSESNQHCIPNQL
Sequences:
>Translated_381_residues MLPLPSSNKLDIPALSRIFDNTTNSYKLLFFRALLSLIQDGKTPDGKVNSTELAQYLLAHAWVPSVYFKLNLGTQDQIVQ HLYDLNLVAVDLSQHKGKPFTLLFEKLAKTNNSKINKQVLKYVPYRLLQPFFSAELQGIKDAEKNNLTYELSQSQFDIVK PIYKISFIEDCNLPQLTLHPDWYEYLCNNIILVQGWAELNWTRYLQRKNPNTPSISNKLTLNTKRESLVKQRKFWDEFIS QHQPKCIFTGEQLSTANYELDHFVPWSYVAHNQFWNLLPILNSCNSSKSNKLPDKCFLQDFTKLHFEAVTMAIKHRRIDI IDDYITILQCPKSELTDKLKFTGKLSHVLQTVLDSAGLQGFEPNWKWTKSESNQHCIPNQL >Mature_381_residues MLPLPSSNKLDIPALSRIFDNTTNSYKLLFFRALLSLIQDGKTPDGKVNSTELAQYLLAHAWVPSVYFKLNLGTQDQIVQ HLYDLNLVAVDLSQHKGKPFTLLFEKLAKTNNSKINKQVLKYVPYRLLQPFFSAELQGIKDAEKNNLTYELSQSQFDIVK PIYKISFIEDCNLPQLTLHPDWYEYLCNNIILVQGWAELNWTRYLQRKNPNTPSISNKLTLNTKRESLVKQRKFWDEFIS QHQPKCIFTGEQLSTANYELDHFVPWSYVAHNQFWNLLPILNSCNSSKSNKLPDKCFLQDFTKLHFEAVTMAIKHRRIDI IDDYITILQCPKSELTDKLKFTGKLSHVLQTVLDSAGLQGFEPNWKWTKSESNQHCIPNQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44244; Mature: 44244
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLPSSNKLDIPALSRIFDNTTNSYKLLFFRALLSLIQDGKTPDGKVNSTELAQYLLAH CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AWVPSVYFKLNLGTQDQIVQHLYDLNLVAVDLSQHKGKPFTLLFEKLAKTNNSKINKQVL HHHCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCHHHHHHH KYVPYRLLQPFFSAELQGIKDAEKNNLTYELSQSQFDIVKPIYKISFIEDCNLPQLTLHP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCCCCEEEECC DWYEYLCNNIILVQGWAELNWTRYLQRKNPNTPSISNKLTLNTKRESLVKQRKFWDEFIS CHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH QHQPKCIFTGEQLSTANYELDHFVPWSYVAHNQFWNLLPILNSCNSSKSNKLPDKCFLQD CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FTKLHFEAVTMAIKHRRIDIIDDYITILQCPKSELTDKLKFTGKLSHVLQTVLDSAGLQG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FEPNWKWTKSESNQHCIPNQL CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPLPSSNKLDIPALSRIFDNTTNSYKLLFFRALLSLIQDGKTPDGKVNSTELAQYLLAH CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AWVPSVYFKLNLGTQDQIVQHLYDLNLVAVDLSQHKGKPFTLLFEKLAKTNNSKINKQVL HHHCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCHHHHHHH KYVPYRLLQPFFSAELQGIKDAEKNNLTYELSQSQFDIVKPIYKISFIEDCNLPQLTLHP HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHEECCCCCCEEEECC DWYEYLCNNIILVQGWAELNWTRYLQRKNPNTPSISNKLTLNTKRESLVKQRKFWDEFIS CHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH QHQPKCIFTGEQLSTANYELDHFVPWSYVAHNQFWNLLPILNSCNSSKSNKLPDKCFLQD CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FTKLHFEAVTMAIKHRRIDIIDDYITILQCPKSELTDKLKFTGKLSHVLQTVLDSAGLQG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FEPNWKWTKSESNQHCIPNQL CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA