Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962020

Identifier: 157962020

GI number: 157962020

Start: 2668506

End: 2669372

Strand: Direct

Name: 157962020

Synonym: Spea_2199

Alternate gene names: NA

Gene position: 2668506-2669372 (Clockwise)

Preceding gene: 157962019

Following gene: 157962021

Centisome position: 51.57

GC content: 44.18

Gene sequence:

>867_bases
ATGAATAAACTATCAAAAATGTTCACACAAACATTAACTGTAATTGGCGTAATGGGTCTCGTGGCCTGTTCTCATTTAAC
ATCGGAGTCAGAGTCTATGAGCAATAAAGAGAAAGCGGTAGCCGTAATTGCAAGCATCGAAACAGGCGACCCAGCAGCAA
TCAACTACATTAATGCAGCGCAATATACGCAACATAATCTAGCCGTTGGTGATGGATTAGCGGGATTTGGAGAGGTGCTA
CAGGCCCTGCCAGAAGGCAGCGCGAAAGCCGGTGTTAAGCGAGCAATTCAAGACGATAATTACGTTGTGCTTCATACTGA
ATACAACTTTTTTGGACCTAAAGTCGGTTTTGATGTATTCCGCTTTGAAGATGGCAAAATTGTTGAGCACTGGGATAACT
TACAAGTAATTGCACCAGTAAATCCAAGCGGACACACTCAGCTTGACGGCAGCACGGCCATTACCGACTTAGATAAGACG
GCAGAGAACAAAGCTATAGTCGCAGACTTTGTTAATACCATCTTGATGAATGGCGACATGAGCCAGATAAACAAGTTCAT
CGACAACGAAGACAGCGCATACATACAACACAACCCAGGGATCGGCGATGGCTTAAGCGGTCTTGGTAAGGCACTCGAAG
AGCTGGCTAATGCAGGGCTTACGATGAAGTATGACACAAATCATAAAATTCTCGGGGAGGGCAATTTTGTAGTCTCTATT
AGTGAAGGTATCTTCGCCAATGAACATGTGGCCTTCTACGACTTATTCCGTCTCGAGAACGGTAAAATCGTTGAGCACTG
GGACACTATCGAAACGATTCCAGCTCAATCGGAGTGGAAAAATACTAACGGTAAATTTGGTTTCTAA

Upstream 100 bases:

>100_bases
TCTGCAAGGTTCGATATTGACCATTTTCCGGCACAGTTCCACACTGCAAAAAAATCCCTTGTCTACTAACCTATAATTCA
TTCAGGCAAGGACGGAAGCA

Downstream 100 bases:

>100_bases
CGTGCTCTAGAATGGCTATTTAGTGCGGTTATTTATACTGCTACTTAACATTAATACAGTTACTTAGCACAGCTATTTAG
CACAGCCAATACTCATCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNKLSKMFTQTLTVIGVMGLVACSHLTSESESMSNKEKAVAVIASIETGDPAAINYINAAQYTQHNLAVGDGLAGFGEVL
QALPEGSAKAGVKRAIQDDNYVVLHTEYNFFGPKVGFDVFRFEDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKT
AENKAIVADFVNTILMNGDMSQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGNFVVSI
SEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKFGF

Sequences:

>Translated_288_residues
MNKLSKMFTQTLTVIGVMGLVACSHLTSESESMSNKEKAVAVIASIETGDPAAINYINAAQYTQHNLAVGDGLAGFGEVL
QALPEGSAKAGVKRAIQDDNYVVLHTEYNFFGPKVGFDVFRFEDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKT
AENKAIVADFVNTILMNGDMSQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGNFVVSI
SEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKFGF
>Mature_288_residues
MNKLSKMFTQTLTVIGVMGLVACSHLTSESESMSNKEKAVAVIASIETGDPAAINYINAAQYTQHNLAVGDGLAGFGEVL
QALPEGSAKAGVKRAIQDDNYVVLHTEYNFFGPKVGFDVFRFEDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKT
AENKAIVADFVNTILMNGDMSQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGNFVVSI
SEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKFGF

Specific function: Unknown

COG id: COG4922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31290; Mature: 31290

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSKMFTQTLTVIGVMGLVACSHLTSESESMSNKEKAVAVIASIETGDPAAINYINAA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEEEEEEECCCCCCEEEEECHH
QYTQHNLAVGDGLAGFGEVLQALPEGSAKAGVKRAIQDDNYVVLHTEYNFFGPKVGFDVF
HHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE
RFEDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKTAENKAIVADFVNTILMNGDM
EECCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH
SQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGNFVVSI
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEE
SEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKFGF
CCCCCCCCCEEEEEEEEECCCCEEEECCCHHCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MNKLSKMFTQTLTVIGVMGLVACSHLTSESESMSNKEKAVAVIASIETGDPAAINYINAA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEEEEEEECCCCCCEEEEECHH
QYTQHNLAVGDGLAGFGEVLQALPEGSAKAGVKRAIQDDNYVVLHTEYNFFGPKVGFDVF
HHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE
RFEDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKTAENKAIVADFVNTILMNGDM
EECCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH
SQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGNFVVSI
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEE
SEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKFGF
CCCCCCCCCEEEEEEEEECCCCEEEECCCHHCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA