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The map label for this gene is rhaS [C]

Identifier: 157962019

GI number: 157962019

Start: 2667453

End: 2668331

Strand: Direct

Name: rhaS [C]

Synonym: Spea_2198

Alternate gene names: 157962019

Gene position: 2667453-2668331 (Clockwise)

Preceding gene: 157962018

Following gene: 157962020

Centisome position: 51.55

GC content: 45.28

Gene sequence:

>879_bases
ATGCCCATCCCAAAAATCGGCTTTAACCATGAAAAATCCAATCAAGCCGAGTTTGAAATCATTGAGCTTGCTTCTCTACT
TTCGAGACCTAGCCTAGATCACGAGCCTCAAATGCCCCATAGGGTGAGCTTTTTCATGTTCATCTGTATTGAAGCCGGGC
AAGGTAGCCACATGGTGGATTTTGAGGAGTATCCATTCGAACCCGGCTCAATTATCTTTGTGCAGCGTGAACAAGTACAC
AGCTTTGATCTGTCATCGAAACCACAAGGTAAAATATTACTCTTCACTCAAGCCTTTTTAGACCGCCTGCATAGCAATAT
GCGCTTGCCAAATTATACGCCTACGCATCTTAACGCCTCCCATTCACCGCAGGCCCAGCTGAGCGAGCTTGATCGCAAGC
GTACTCGCACATTAATCGCTGAAATGATTACCGAGCAGCAACAAGAGAACTGTGAGCCCTTAATCATCATGTATCTTTTC
TCTGCACTCGCGTTGATTTTTCATCGCTTACGCCCAGAGTCCGTTCACGATAGGCTTACGGTGGAACAAAATGTTCGCTT
AGCGCGATTTTTTGAACTGATGCAGCAAAACTTTTCGCGGGTGCGTGACGCCAACTGGTACGCACATCGACTCAACACCA
CCTATAAAACCCTTAACCAAGTATGTAAGTTGGCAACGGGTTTAACCGCAAAGCAGATGATTGACGCCTTTACAGTCGTT
GAGATGAAAAGGCGCTTAGTGGTTAATAGTACAGCTTCACAACAGATGGCCTATGACTTCGGTTTCGAAGATGCCAGTAA
CTTTGTTAAATATTTTAAGAATCTCACCGGGCTAACGCCGACACAATTTCAGACCAAATACCGTAAACCTGTTCTATAG

Upstream 100 bases:

>100_bases
ATCACGTAGCATTCAACAATGCTAAGCTTAGCGAGCAATCCATTGCAATGTTTCAAGATAAGCAATTCAAACTAATCAAA
TTCGGTAGGACGTGCTGGCA

Downstream 100 bases:

>100_bases
CGGTAACTGCTTAAACCCACATTGTCCCAAACCCACCAATTGTCATAATTTTCAGTCGGTTAGCGTTAAAGCTATCTGCA
AGGTTCGATATTGACCATTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Transcriptional Regulator; AraC-Type Transcription Regulator; Transcriptional Regulator PobR; Transcriptional Regulator Arac Family; Regulatory Helix-Turn-Helix Protein AraC Family; Vegetative Cell Wall; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein; Helix-Turn-Helix AraC Domain Protein

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MPIPKIGFNHEKSNQAEFEIIELASLLSRPSLDHEPQMPHRVSFFMFICIEAGQGSHMVDFEEYPFEPGSIIFVQREQVH
SFDLSSKPQGKILLFTQAFLDRLHSNMRLPNYTPTHLNASHSPQAQLSELDRKRTRTLIAEMITEQQQENCEPLIIMYLF
SALALIFHRLRPESVHDRLTVEQNVRLARFFELMQQNFSRVRDANWYAHRLNTTYKTLNQVCKLATGLTAKQMIDAFTVV
EMKRRLVVNSTASQQMAYDFGFEDASNFVKYFKNLTGLTPTQFQTKYRKPVL

Sequences:

>Translated_292_residues
MPIPKIGFNHEKSNQAEFEIIELASLLSRPSLDHEPQMPHRVSFFMFICIEAGQGSHMVDFEEYPFEPGSIIFVQREQVH
SFDLSSKPQGKILLFTQAFLDRLHSNMRLPNYTPTHLNASHSPQAQLSELDRKRTRTLIAEMITEQQQENCEPLIIMYLF
SALALIFHRLRPESVHDRLTVEQNVRLARFFELMQQNFSRVRDANWYAHRLNTTYKTLNQVCKLATGLTAKQMIDAFTVV
EMKRRLVVNSTASQQMAYDFGFEDASNFVKYFKNLTGLTPTQFQTKYRKPVL
>Mature_291_residues
PIPKIGFNHEKSNQAEFEIIELASLLSRPSLDHEPQMPHRVSFFMFICIEAGQGSHMVDFEEYPFEPGSIIFVQREQVHS
FDLSSKPQGKILLFTQAFLDRLHSNMRLPNYTPTHLNASHSPQAQLSELDRKRTRTLIAEMITEQQQENCEPLIIMYLFS
ALALIFHRLRPESVHDRLTVEQNVRLARFFELMQQNFSRVRDANWYAHRLNTTYKTLNQVCKLATGLTAKQMIDAFTVVE
MKRRLVVNSTASQQMAYDFGFEDASNFVKYFKNLTGLTPTQFQTKYRKPVL

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33998; Mature: 33866

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPKIGFNHEKSNQAEFEIIELASLLSRPSLDHEPQMPHRVSFFMFICIEAGQGSHMVD
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEECCCCCCEEC
FEEYPFEPGSIIFVQREQVHSFDLSSKPQGKILLFTQAFLDRLHSNMRLPNYTPTHLNAS
HHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
HSPQAQLSELDRKRTRTLIAEMITEQQQENCEPLIIMYLFSALALIFHRLRPESVHDRLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VEQNVRLARFFELMQQNFSRVRDANWYAHRLNTTYKTLNQVCKLATGLTAKQMIDAFTVV
HHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMKRRLVVNSTASQQMAYDFGFEDASNFVKYFKNLTGLTPTQFQTKYRKPVL
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
PIPKIGFNHEKSNQAEFEIIELASLLSRPSLDHEPQMPHRVSFFMFICIEAGQGSHMVD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEECCCCCCEEC
FEEYPFEPGSIIFVQREQVHSFDLSSKPQGKILLFTQAFLDRLHSNMRLPNYTPTHLNAS
HHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
HSPQAQLSELDRKRTRTLIAEMITEQQQENCEPLIIMYLFSALALIFHRLRPESVHDRLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VEQNVRLARFFELMQQNFSRVRDANWYAHRLNTTYKTLNQVCKLATGLTAKQMIDAFTVV
HHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMKRRLVVNSTASQQMAYDFGFEDASNFVKYFKNLTGLTPTQFQTKYRKPVL
HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA