Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962010
Identifier: 157962010
GI number: 157962010
Start: 2654391
End: 2654663
Strand: Direct
Name: 157962010
Synonym: Spea_2189
Alternate gene names: NA
Gene position: 2654391-2654663 (Clockwise)
Preceding gene: 157962007
Following gene: 157962013
Centisome position: 51.3
GC content: 41.03
Gene sequence:
>273_bases ATGCCAAAATATGTGATAGAAAGACTACTTCCCGGTGCAGGGGATTTATCGGCTAGCGACTTACAGGGGATCTCTAGGAA GTCTTGTGATGTGCTAGAAGCGTTAGGACCCAAAGTGCAATGGGTTGAAAGTTATATTACCGATAATAAGATCTATTGTG TTTATATTGCGCCAGATGAAAGCTTGATCAGAAAACACGCGGAAATGGGAGAGTTTCCAATAGAAGCCGTTAATCAAGTT AGGACGATTATTGATCCAACGACATCTGAATAA
Upstream 100 bases:
>100_bases CCTAAAGCATACGAGGTAGCTCCTCAACTATACTTTTAATTCGATGCTTGAAAGCTTAATTCGTAGTCAACTTAAAAGTT CGGTAGAGAGGACAGTTAAC
Downstream 100 bases:
>100_bases ATTCAAGCAGACTCGAGCTAACAAGCCTATTGTTGGCTCGAGTTTACTCGGGAAGTTATTCCCCGCGCCTTATGAAATCA CCAAAAGTTTACCTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MPKYVIERLLPGAGDLSASDLQGISRKSCDVLEALGPKVQWVESYITDNKIYCVYIAPDESLIRKHAEMGEFPIEAVNQV RTIIDPTTSE
Sequences:
>Translated_90_residues MPKYVIERLLPGAGDLSASDLQGISRKSCDVLEALGPKVQWVESYITDNKIYCVYIAPDESLIRKHAEMGEFPIEAVNQV RTIIDPTTSE >Mature_89_residues PKYVIERLLPGAGDLSASDLQGISRKSCDVLEALGPKVQWVESYITDNKIYCVYIAPDESLIRKHAEMGEFPIEAVNQVR TIIDPTTSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10025; Mature: 9893
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYVIERLLPGAGDLSASDLQGISRKSCDVLEALGPKVQWVESYITDNKIYCVYIAPDE CCHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCH SLIRKHAEMGEFPIEAVNQVRTIIDPTTSE HHHHHHHHCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKYVIERLLPGAGDLSASDLQGISRKSCDVLEALGPKVQWVESYITDNKIYCVYIAPDE CHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCH SLIRKHAEMGEFPIEAVNQVRTIIDPTTSE HHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA