| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961694
Identifier: 157961694
GI number: 157961694
Start: 2278702
End: 2279517
Strand: Direct
Name: 157961694
Synonym: Spea_1870
Alternate gene names: NA
Gene position: 2278702-2279517 (Clockwise)
Preceding gene: 157961689
Following gene: 157961695
Centisome position: 44.04
GC content: 35.78
Gene sequence:
>816_bases TTGGAACTTTGTGAAACTTCAAAAGATTATGAGTTACTAACCCAAAAGATATATAAAGCTATATTGGAGTCAGAAGGCGT CGAAAATCTTGAAGTAAAGCATGATGAGAAAGTTCGAGGTAAGTCTGGAGTAGAGCATCAAATTGATGTTTTTTGGGAGT ATAAGTATGCAGGAGTGAGCCATAAGGTACTTATTGAATGTAAGTATTATTCTAAAGCGGTCTCTCTTATTCATGCTAGA AATATGCTCGGGCTATTAAATGACATTCCAAATAGTCAAGGCTTACTGGTAACGACCCAAGGATTTCAATCTGGCGTTAT CGACTTCTGCAACCACTATGAAATAAAATTGAAGCGAATTAGACCACCTAAAGGTTCTGATTGGGATGGCTGCATTCAAA TTGTGAATGTCAATGGTGTATTATATCAAAATCAATATTTGAACTTAGGTTTTTCCTTTGATGCTAGAGATGAGGGAACG AAGGCTTTCGTTGAGAACAACGGGAAGGAAATATCATTTAATGCATATGATGTGACCGTTGAAGACGAAGGTGAAAAATA TTTTATTGGTAAGTGGTTAGATAAAAAAATTGTTTCTAATCTCGCTGAATTGGGCACACAAAGAGAGGAAGTAATCGAAC CTGAGGACGCACATGTCATTTTATCTTCCGGTGATAAATTAAAACTACGTAATGTAAAAGTTCTTTGGGAACTAACAAAG CAAGATTTATCCTTATCAGTCGACGCTATGGATTTCGTACATGCTGTTTTAGAAGATTTTGGTTCAGGTGAAGTGGAATA CACTTTAAACAAATAA
Upstream 100 bases:
>100_bases TTCAGCGCGCCTCTGATAGAGTTCTTGTAAATCAATAGCTTTCCTTTAGCAAGGCTTAAGTAGTAGGTTTGTTAAATATC ATGTTCATTAGGAGGTTAAT
Downstream 100 bases:
>100_bases ACATAGCAAAAAAACACTGGGTTGGTACGTTTCACTCTACAGTTTTGGTATGGATTTCCATGCACTTTGTAGTTAATCGT ATCGCAACTTATATAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MELCETSKDYELLTQKIYKAILESEGVENLEVKHDEKVRGKSGVEHQIDVFWEYKYAGVSHKVLIECKYYSKAVSLIHAR NMLGLLNDIPNSQGLLVTTQGFQSGVIDFCNHYEIKLKRIRPPKGSDWDGCIQIVNVNGVLYQNQYLNLGFSFDARDEGT KAFVENNGKEISFNAYDVTVEDEGEKYFIGKWLDKKIVSNLAELGTQREEVIEPEDAHVILSSGDKLKLRNVKVLWELTK QDLSLSVDAMDFVHAVLEDFGSGEVEYTLNK
Sequences:
>Translated_271_residues MELCETSKDYELLTQKIYKAILESEGVENLEVKHDEKVRGKSGVEHQIDVFWEYKYAGVSHKVLIECKYYSKAVSLIHAR NMLGLLNDIPNSQGLLVTTQGFQSGVIDFCNHYEIKLKRIRPPKGSDWDGCIQIVNVNGVLYQNQYLNLGFSFDARDEGT KAFVENNGKEISFNAYDVTVEDEGEKYFIGKWLDKKIVSNLAELGTQREEVIEPEDAHVILSSGDKLKLRNVKVLWELTK QDLSLSVDAMDFVHAVLEDFGSGEVEYTLNK >Mature_271_residues MELCETSKDYELLTQKIYKAILESEGVENLEVKHDEKVRGKSGVEHQIDVFWEYKYAGVSHKVLIECKYYSKAVSLIHAR NMLGLLNDIPNSQGLLVTTQGFQSGVIDFCNHYEIKLKRIRPPKGSDWDGCIQIVNVNGVLYQNQYLNLGFSFDARDEGT KAFVENNGKEISFNAYDVTVEDEGEKYFIGKWLDKKIVSNLAELGTQREEVIEPEDAHVILSSGDKLKLRNVKVLWELTK QDLSLSVDAMDFVHAVLEDFGSGEVEYTLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30838; Mature: 30838
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELCETSKDYELLTQKIYKAILESEGVENLEVKHDEKVRGKSGVEHQIDVFWEYKYAGVS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC HKVLIECKYYSKAVSLIHARNMLGLLNDIPNSQGLLVTTQGFQSGVIDFCNHYEIKLKRI EEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEE RPPKGSDWDGCIQIVNVNGVLYQNQYLNLGFSFDARDEGTKAFVENNGKEISFNAYDVTV CCCCCCCCCCEEEEEECCEEEEECCEEEEEEEECCCCCCCEEEECCCCCEEEEEEEEEEE EDEGEKYFIGKWLDKKIVSNLAELGTQREEVIEPEDAHVILSSGDKLKLRNVKVLWELTK ECCCCEEEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCEEEECCEEEEEHHHH QDLSLSVDAMDFVHAVLEDFGSGEVEYTLNK HCCCEEHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MELCETSKDYELLTQKIYKAILESEGVENLEVKHDEKVRGKSGVEHQIDVFWEYKYAGVS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC HKVLIECKYYSKAVSLIHARNMLGLLNDIPNSQGLLVTTQGFQSGVIDFCNHYEIKLKRI EEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEEE RPPKGSDWDGCIQIVNVNGVLYQNQYLNLGFSFDARDEGTKAFVENNGKEISFNAYDVTV CCCCCCCCCCEEEEEECCEEEEECCEEEEEEEECCCCCCCEEEECCCCCEEEEEEEEEEE EDEGEKYFIGKWLDKKIVSNLAELGTQREEVIEPEDAHVILSSGDKLKLRNVKVLWELTK ECCCCEEEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCEEEECCEEEEEHHHH QDLSLSVDAMDFVHAVLEDFGSGEVEYTLNK HCCCEEHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA