| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961646
Identifier: 157961646
GI number: 157961646
Start: 2223553
End: 2223906
Strand: Direct
Name: 157961646
Synonym: Spea_1822
Alternate gene names: NA
Gene position: 2223553-2223906 (Clockwise)
Preceding gene: 157961645
Following gene: 157961648
Centisome position: 42.97
GC content: 40.68
Gene sequence:
>354_bases ATGGGGGCTTCAGAGCTGAGTGTTATGAACATGATAGTTAGTATGGTCATTGCGCTCACTATCTATTTATTCAAAGTGCT AGTCATTGGTTTGTGCCGGAGTTTATTGACTCTGTCTGAAGATGGGCGAATAACACCAAAGCCTACTATGCCTGCTTCGC AGATAAAGCTTACGCAGAAGAAAGTCTCTAATTTTGGCTTATGTACTTTTTGTAATCAGTTTGAAACTAAAAATACCCTG TCAGGTCGTTATGTCTGCTCTGATTGCTATCAGATCTTTTTAAAAGTTAAGCAGTCATCGAGCCTAATATCTGCAGTACC TCAGGCGATGTCTGGGGGGAAAAAGTGCTCATAA
Upstream 100 bases:
>100_bases CAGTCAGCGAGTGTTTGAACGACAAATCCCTATAATTGACAGGGGCTTAACTGTTTTAGCTGCAATTATTTGTTTATCGG GCATTGTCTTTATTATCAAA
Downstream 100 bases:
>100_bases TGGCAAAAAAATAGTCGGTATAGACCGACTACTTTCATTCATACAATCGCTACGCACTACTTGTAAACTACTTGTTCATT TCTCGTTCTTTATTCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MGASELSVMNMIVSMVIALTIYLFKVLVIGLCRSLLTLSEDGRITPKPTMPASQIKLTQKKVSNFGLCTFCNQFETKNTL SGRYVCSDCYQIFLKVKQSSSLISAVPQAMSGGKKCS
Sequences:
>Translated_117_residues MGASELSVMNMIVSMVIALTIYLFKVLVIGLCRSLLTLSEDGRITPKPTMPASQIKLTQKKVSNFGLCTFCNQFETKNTL SGRYVCSDCYQIFLKVKQSSSLISAVPQAMSGGKKCS >Mature_116_residues GASELSVMNMIVSMVIALTIYLFKVLVIGLCRSLLTLSEDGRITPKPTMPASQIKLTQKKVSNFGLCTFCNQFETKNTLS GRYVCSDCYQIFLKVKQSSSLISAVPQAMSGGKKCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12769; Mature: 12638
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASELSVMNMIVSMVIALTIYLFKVLVIGLCRSLLTLSEDGRITPKPTMPASQIKLTQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KVSNFGLCTFCNQFETKNTLSGRYVCSDCYQIFLKVKQSSSLISAVPQAMSGGKKCS HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GASELSVMNMIVSMVIALTIYLFKVLVIGLCRSLLTLSEDGRITPKPTMPASQIKLTQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KVSNFGLCTFCNQFETKNTLSGRYVCSDCYQIFLKVKQSSSLISAVPQAMSGGKKCS HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA