| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961645
Identifier: 157961645
GI number: 157961645
Start: 2223106
End: 2223444
Strand: Direct
Name: 157961645
Synonym: Spea_1821
Alternate gene names: NA
Gene position: 2223106-2223444 (Clockwise)
Preceding gene: 157961644
Following gene: 157961646
Centisome position: 42.96
GC content: 42.77
Gene sequence:
>339_bases ATGAAATTGATATCGTGTACTGCCATGTTATTTGTATTAAGTGTATTTTCGACTCAGGCGGCCACAGTCGGCTGTGAGCG GGTTGGTGGCATTAAATGCCAGAAAGTGGGTAAATCTTATGGCCGCACTAAGGTGATAGTCGTACCCAAAAATCATCGTC ATTATCATGCTTATCACTCTCCTCTGCTAACCGCAATGGGGATGGCTATTATATTAGATGCTGCGGGTAATGCCGTCACA GATAAAGGCAACAAAGTCGTTGTGTTAGGCGAGGGCAATGAAGTAAAGCAGGTTTATGAGAAAGATGGTGTTGTTTATCT TATCAAAGAATTAGGCTGA
Upstream 100 bases:
>100_bases ACTATCACTTTAATATTCTGCTACACTATGCGCTAGACAGGTGTCTTTTGCTGGGTTATGATCTGCTTTGATTTAGACAC AACTGAGAAGAGAGCTGTTT
Downstream 100 bases:
>100_bases AACATGACCAGTCAGCGAGTGTTTGAACGACAAATCCCTATAATTGACAGGGGCTTAACTGTTTTAGCTGCAATTATTTG TTTATCGGGCATTGTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKLISCTAMLFVLSVFSTQAATVGCERVGGIKCQKVGKSYGRTKVIVVPKNHRHYHAYHSPLLTAMGMAIILDAAGNAVT DKGNKVVVLGEGNEVKQVYEKDGVVYLIKELG
Sequences:
>Translated_112_residues MKLISCTAMLFVLSVFSTQAATVGCERVGGIKCQKVGKSYGRTKVIVVPKNHRHYHAYHSPLLTAMGMAIILDAAGNAVT DKGNKVVVLGEGNEVKQVYEKDGVVYLIKELG >Mature_112_residues MKLISCTAMLFVLSVFSTQAATVGCERVGGIKCQKVGKSYGRTKVIVVPKNHRHYHAYHSPLLTAMGMAIILDAAGNAVT DKGNKVVVLGEGNEVKQVYEKDGVVYLIKELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12065; Mature: 12065
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLISCTAMLFVLSVFSTQAATVGCERVGGIKCQKVGKSYGRTKVIVVPKNHRHYHAYHS CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEHHHHHHCCCCEEEEEECCCCCEEEHHHH PLLTAMGMAIILDAAGNAVTDKGNKVVVLGEGNEVKQVYEKDGVVYLIKELG HHHHHHHHHEEEECCCCEEECCCCEEEEEECCCHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKLISCTAMLFVLSVFSTQAATVGCERVGGIKCQKVGKSYGRTKVIVVPKNHRHYHAYHS CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEHHHHHHCCCCEEEEEECCCCCEEEHHHH PLLTAMGMAIILDAAGNAVTDKGNKVVVLGEGNEVKQVYEKDGVVYLIKELG HHHHHHHHHEEEECCCCEEECCCCEEEEEECCCHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA