| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961590
Identifier: 157961590
GI number: 157961590
Start: 2147346
End: 2148221
Strand: Direct
Name: 157961590
Synonym: Spea_1766
Alternate gene names: NA
Gene position: 2147346-2148221 (Clockwise)
Preceding gene: 157961589
Following gene: 157961591
Centisome position: 41.5
GC content: 45.66
Gene sequence:
>876_bases ATGCAACTGTTTGTTAAAGATTTAACTGTTATCGATTTCTCATATCTTTGTCCTATTCGTGGCATGGTAGGAGAAAGCTG GATTGTCGACGTTCTGCTTGATGGTGGGTTAGATGAGCAAAATATGGTGCTCGATTTCGCTAAAGTGAAACGTACCATTA AAAGCACCATAGATAATGTGGCCGATCACCGCCTGTTGATCCCAACTGCCTGCAGTGAAGTGCGCTGGCAGCAACAAGGT GACAGAGTCTGGATGGATTTCAATAGTCAACAAGGCGACATCCACTTAGCGTGTCCTTCAGAGGCTTTTGCACTCATTCC TAGTGAATTGATAGACTTTGAAAGCGTGAATAAATTTCTGCAGCAAGCACTAAAACAAGCATTGCCAGCCAATGTTGAAG GCATTTCGCTGACATTAAGAAATGAGATCCACGAGGCGCCTTACTACCATTACAGTCATGGTTTGAAAAAGCATGATGGT AATTGCCAGCGAATTGCACACGGACACCGTAGTCCGGTCACCGTATTTGAAAATGGTGTCGCCGCACCTAAATGGGATGA GTATTGGGCCAAACGCTGGCAGGATATTTACCTAGCCACCGTAGAAGATGTGGTGTCAGTAAGCTCATTAAGCCTATCGC CTCAAGCAAGCATCAATGATGGCAGCCATTACGGGTTTCACTATCAGGCACCACAGGGTGACTTTCAGTTAGCCATGCCT AAGGGGCGCTGCGATATTCTTCCACACGATACAACGGTGGAGTTATTAGCGGATTATATGGCGCAAACATTGTTTGAAAA AGTGCCGAGTAGCGATTTTAAGGTAATTGCCTATGAAGGCGTAGGTAAAGGGGCGATTGCTAGCCGAAATGCCTAG
Upstream 100 bases:
>100_bases CGAGGAGTCATTTTATTTGACTCAACTTAAGTACGATTATCCTGCGGCCATTGCTGTTTGGACTTAGGAAGGTAGACTGT TTTTCTACCTAGGAGCACAA
Downstream 100 bases:
>100_bases CAAGCCCACTCGTTCATAAAGTATCTAAGGAGTGGCTTTGAGACCATTTACTCGTATCATCTTTAGTAGTGTGTTGACCA GTATGGCCTTTCAGGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: 6-Pyruvoyl-Tetrahydropterin Synthase
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MQLFVKDLTVIDFSYLCPIRGMVGESWIVDVLLDGGLDEQNMVLDFAKVKRTIKSTIDNVADHRLLIPTACSEVRWQQQG DRVWMDFNSQQGDIHLACPSEAFALIPSELIDFESVNKFLQQALKQALPANVEGISLTLRNEIHEAPYYHYSHGLKKHDG NCQRIAHGHRSPVTVFENGVAAPKWDEYWAKRWQDIYLATVEDVVSVSSLSLSPQASINDGSHYGFHYQAPQGDFQLAMP KGRCDILPHDTTVELLADYMAQTLFEKVPSSDFKVIAYEGVGKGAIASRNA
Sequences:
>Translated_291_residues MQLFVKDLTVIDFSYLCPIRGMVGESWIVDVLLDGGLDEQNMVLDFAKVKRTIKSTIDNVADHRLLIPTACSEVRWQQQG DRVWMDFNSQQGDIHLACPSEAFALIPSELIDFESVNKFLQQALKQALPANVEGISLTLRNEIHEAPYYHYSHGLKKHDG NCQRIAHGHRSPVTVFENGVAAPKWDEYWAKRWQDIYLATVEDVVSVSSLSLSPQASINDGSHYGFHYQAPQGDFQLAMP KGRCDILPHDTTVELLADYMAQTLFEKVPSSDFKVIAYEGVGKGAIASRNA >Mature_291_residues MQLFVKDLTVIDFSYLCPIRGMVGESWIVDVLLDGGLDEQNMVLDFAKVKRTIKSTIDNVADHRLLIPTACSEVRWQQQG DRVWMDFNSQQGDIHLACPSEAFALIPSELIDFESVNKFLQQALKQALPANVEGISLTLRNEIHEAPYYHYSHGLKKHDG NCQRIAHGHRSPVTVFENGVAAPKWDEYWAKRWQDIYLATVEDVVSVSSLSLSPQASINDGSHYGFHYQAPQGDFQLAMP KGRCDILPHDTTVELLADYMAQTLFEKVPSSDFKVIAYEGVGKGAIASRNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32626; Mature: 32626
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFVKDLTVIDFSYLCPIRGMVGESWIVDVLLDGGLDEQNMVLDFAKVKRTIKSTIDNV CEEEECHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ADHRLLIPTACSEVRWQQQGDRVWMDFNSQQGDIHLACPSEAFALIPSELIDFESVNKFL HCCEEECCCHHHHHHHHHCCCEEEEEECCCCCCEEEECCCHHHHHCHHHHHCHHHHHHHH QQALKQALPANVEGISLTLRNEIHEAPYYHYSHGLKKHDGNCQRIAHGHRSPVTVFENGV HHHHHHHCCCCCCEEEEEEHHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCEEEEECCC AAPKWDEYWAKRWQDIYLATVEDVVSVSSLSLSPQASINDGSHYGFHYQAPQGDFQLAMP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECC KGRCDILPHDTTVELLADYMAQTLFEKVPSSDFKVIAYEGVGKGAIASRNA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MQLFVKDLTVIDFSYLCPIRGMVGESWIVDVLLDGGLDEQNMVLDFAKVKRTIKSTIDNV CEEEECHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ADHRLLIPTACSEVRWQQQGDRVWMDFNSQQGDIHLACPSEAFALIPSELIDFESVNKFL HCCEEECCCHHHHHHHHHCCCEEEEEECCCCCCEEEECCCHHHHHCHHHHHCHHHHHHHH QQALKQALPANVEGISLTLRNEIHEAPYYHYSHGLKKHDGNCQRIAHGHRSPVTVFENGV HHHHHHHCCCCCCEEEEEEHHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCEEEEECCC AAPKWDEYWAKRWQDIYLATVEDVVSVSSLSLSPQASINDGSHYGFHYQAPQGDFQLAMP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECC KGRCDILPHDTTVELLADYMAQTLFEKVPSSDFKVIAYEGVGKGAIASRNA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA