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The map label for this gene is ndpA [C]

Identifier: 157961589

GI number: 157961589

Start: 2146033

End: 2147061

Strand: Direct

Name: ndpA [C]

Synonym: Spea_1765

Alternate gene names: 157961589

Gene position: 2146033-2147061 (Clockwise)

Preceding gene: 157961586

Following gene: 157961590

Centisome position: 41.47

GC content: 45.29

Gene sequence:

>1029_bases
ATGAGTATTAACGTCGAACAAGCCATTATCCACTCCATTTCTCAAGATGGTGAAGGTCAACTTAGTTGTCGATTACGTCC
ACAACCTTTGCTAAATAGCCAAGCAGTTGAGGCGATGCTAGAAGAGTTGCATCAAACCTACACCACCAAAGCGGGAAAAG
GGTTTGGTCACTTTGGCATTAATGGAGAAGATGGCGAAGCAAACACTAAGTTTGAAGAAGCGCTAACTACCTACCGTAGT
GGTGAGCTTGGATTCGTCGAGTTTTCGGGCATAGCCGGCAAGTTATTACAAGAGGAGCTGGCTAAATATGACTTTAGCAC
TGGCGGCTTCCTATTGCTGTCTTGCTATACCTACATGACTAGCGATTATCTATTTGTGTCTTTGCTCAATGCAAAATCGT
CAATGACAGTACTCGATGATATGGAGCTGTCGCAAAACACTCATTTAGACCTTAATAATGTGCAATTGGCTGCACGTATT
GATCTGACTGAGTGGCAAGCCGATCCTGAGTCGAAAAAGTACATCTCTTTTATCCGTGGTCGTGCGGGTCGTAAAGTGGC
CGACTTTTTCCTCGACTTTATGGGCTGTGTCGAAGGTGTTAATACTAAGGCGCAGAATAAGTCGCTGATGAATGCGGTTG
AAGATTTTGTCGGTAACAGTGAGCTGACTAAAGATGAGCGTCAGCAAGCCCGTGAGCGTGTATTCGATTATTGTACCGAG
CGTTGCGATGAAGGCGCGTCGATTCAGATTAAAGACCTGGCCGATGAGTTAGCTGATCAAGGCATGGACTCTTTCTATGA
CTTCGCCCAAGGGGGCAATTATGAGTTAGAAGAGGAGTTCCCTGGTGATAAGCCAACATTAAGACAGTTGAAGAAATTCT
CAGGCACTGGCGGCGGGGTAACATTAAGTTTTGACGGTCAGCACCTTGGTGAAAGAGTGATCTATGATCCTGTATCAGAT
ACCATCATCATTAAAGGTGTGCCTGCCAACCTTAAAGATCAGCTAGATCGTCGTCTGAAAGGGGAATAA

Upstream 100 bases:

>100_bases
GCGTTAAGAAATGCTCCTATTTCGGCTGCAAAAAACAATCATTTTATATTTTTGAGCGCAGGCCATTCGCTTCGCTCCTT
GCCAAACTTATCGAGGCTCA

Downstream 100 bases:

>100_bases
TTGCCTTAGCCGTCCTCAGTGGCGATTAACGTAATGAACCAGAGAACCGAGCCATAAGTGCTCGGTTTTTTTTCGGACAT
AATTTTTAGTGCCATTCGAT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGINGEDGEANTKFEEALTTYRS
GELGFVEFSGIAGKLLQEELAKYDFSTGGFLLLSCYTYMTSDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARI
DLTEWQADPESKKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE
RCDEGASIQIKDLADELADQGMDSFYDFAQGGNYELEEEFPGDKPTLRQLKKFSGTGGGVTLSFDGQHLGERVIYDPVSD
TIIIKGVPANLKDQLDRRLKGE

Sequences:

>Translated_342_residues
MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGINGEDGEANTKFEEALTTYRS
GELGFVEFSGIAGKLLQEELAKYDFSTGGFLLLSCYTYMTSDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARI
DLTEWQADPESKKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE
RCDEGASIQIKDLADELADQGMDSFYDFAQGGNYELEEEFPGDKPTLRQLKKFSGTGGGVTLSFDGQHLGERVIYDPVSD
TIIIKGVPANLKDQLDRRLKGE
>Mature_341_residues
SINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGINGEDGEANTKFEEALTTYRSG
ELGFVEFSGIAGKLLQEELAKYDFSTGGFLLLSCYTYMTSDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARID
LTEWQADPESKKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTER
CDEGASIQIKDLADELADQGMDSFYDFAQGGNYELEEEFPGDKPTLRQLKKFSGTGGGVTLSFDGQHLGERVIYDPVSDT
IIIKGVPANLKDQLDRRLKGE

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family

Homologues:

Organism=Escherichia coli, GI1788513, Length=341, Percent_Identity=44.8680351906158, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDPA_SHEPA (A8H3F1)

Other databases:

- EMBL:   CP000851
- RefSeq:   YP_001501623.1
- STRING:   A8H3F1
- GeneID:   5662160
- GenomeReviews:   CP000851_GR
- KEGG:   spl:Spea_1765
- NMPDR:   fig|398579.3.peg.1520
- eggNOG:   COG3081
- HOGENOM:   HBG296787
- OMA:   TESEFGH
- ProtClustDB:   PRK00378
- BioCyc:   SPEA398579:SPEA_1765-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_00730
- InterPro:   IPR007358

Pfam domain/function: PF04245 NA37

EC number: NA

Molecular weight: Translated: 38073; Mature: 37942

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGI
CCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NGEDGEANTKFEEALTTYRSGELGFVEFSGIAGKLLQEELAKYDFSTGGFLLLSCYTYMT
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARIDLTEWQADPESKKYISFIRG
HHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHC
RAGRKVADFFLDFMGCVEGVNTKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RCDEGASIQIKDLADELADQGMDSFYDFAQGGNYELEEEFPGDKPTLRQLKKFSGTGGGV
HHCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
TLSFDGQHLGERVIYDPVSDTIIIKGVPANLKDQLDRRLKGE
EEEECCHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SINVEQAIIHSISQDGEGQLSCRLRPQPLLNSQAVEAMLEELHQTYTTKAGKGFGHFGI
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NGEDGEANTKFEEALTTYRSGELGFVEFSGIAGKLLQEELAKYDFSTGGFLLLSCYTYMT
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SDYLFVSLLNAKSSMTVLDDMELSQNTHLDLNNVQLAARIDLTEWQADPESKKYISFIRG
HHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHC
RAGRKVADFFLDFMGCVEGVNTKAQNKSLMNAVEDFVGNSELTKDERQQARERVFDYCTE
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RCDEGASIQIKDLADELADQGMDSFYDFAQGGNYELEEEFPGDKPTLRQLKKFSGTGGGV
HHCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
TLSFDGQHLGERVIYDPVSDTIIIKGVPANLKDQLDRRLKGE
EEEECCHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA