| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961584
Identifier: 157961584
GI number: 157961584
Start: 2138746
End: 2140185
Strand: Direct
Name: 157961584
Synonym: Spea_1760
Alternate gene names: NA
Gene position: 2138746-2140185 (Clockwise)
Preceding gene: 157961582
Following gene: 157961586
Centisome position: 41.33
GC content: 45.49
Gene sequence:
>1440_bases ATGAAAACCATTATTATTGGGTCGACAAAACACCTAGCTTTTGCCCTATTTTACGCCTCTTTAGGAACCTTTATTGCATT AATTGCGATGGCTGTTTGGTTTCTTAATTCACGCCCCGATCTGTCGATTTGGCACACAACCAAATTAACCTCTGAATACC GCGCACAAAGTGAAGTTAGCACTTTTTCTGACTATATGAAGCTTGAAGATAAGCTGTTCACTGAGCTAGAGACTAAGGTT TATCTTGAACCATCAGAGCCTCAGCCTTTCGATATTCTAAACCGTTATGTGCATGGCAGCTATTCTGATCCTGGTCATTG GACACAGGATTGGAATCGCAGTTATGAATGGCCAACAGATAATGCTGAATTCGGGGTACTTTTACTCCATGGCATGTCTG ACTCTCCCTATGCCTTGTCGCATTTCGCTAACCACTATAAAGACAGGGCGCATATTTTAGGACTTAGGCTACCGGGGCAT GGCACCTTACCATCGGCGTTAACGAATATCGATTGGCAAGATATGGCGGGAGCAGTGGCTCTGGCTACAAGGCATATGAA GCAAGTGTTAGGTGAAAAGCCTTTGTATTTAATTGGTTTCTCTACGGGGGCGGCATTGGCTCTTAATCATGAACTTGAGC GCATAGCTGCCAATAAGGACGCTGATTACTCGGCCATGGTGCTGATCTCTCCAGCCATAGGCTTACCAGCTGTTGCCGCT GGAGCTAGGTGGCAAGCAAGACTTGGGATTGTACTGGGTTTAGATAAGCTGAGTTGGAATAGCATTCAAGCGGAATACGA CCCTTTTAAGTATGGCTCTTTTGCCGTCAATGCTGGAGATGTGGTTTATCAACTTTCTATGCGTAACCATGATCTAATCC TGCGACAGGGGCGGGAGCGACTCAAGGGGTTACCACCAATATTGACGTTTCAGTCACTTACCGATGATACCGTTGATACC AGTGCCGTGATCAGTGCGCTATATGGTCAGTTACCCGATGCGGGCCACGAGTTAGTGTTATTTGATATCAACAGGACGAA GGTGAATTTGAGTCTTATCTTGAATGATCCCTTGAAGCCGTATCGAGAGATGATGACACAAGGGGAATTTAACTATGAGT TCACCTTAGTTGAAAACGAGAGCCTTGAGAGTCGGGATATTCAGGCTCGCCGATTAAATGACAATAGTACAAGCTCTCTT GGGCTCAGCTGGCCAAAACAGATCTACTCCTTATCACATGTTGCGTTGCCATTTCCGAAAAGCGATGCGTTGTATGGCCC TATTTGGAATAGCGATAAACCTCATATCCAGATAGGCACGGGAGCATCCCGGGGGGAGCGAGGCGTGATAAGTGTATCTG CTAGTGAGATCTTAAGACAAAAGTGGAACCCATTTCATCCTTACATGCTAAGCAAAATGGATGAAGTGATAGTTCCTTAA
Upstream 100 bases:
>100_bases TTATTTTTATTCAATTTTCAGCCTATCTTTACCGTTTCGGCGTAAGAGTGTGTAATTTATCTTATATTACATTGCTTGTT TAGGGAGAAACGCAACGATT
Downstream 100 bases:
>100_bases TTGTGGTACTTGTTTGGCTAACAAGCCTGATTAACGGTTAAAGATTAAAATGTGCGCTTTCGTAGTGGCTTCGCTACATT TTGCTTGGCAGACCCATTTA
Product: lysophospholipase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP
Sequences:
>Translated_479_residues MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP >Mature_479_residues MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53690; Mature: 53690
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVS CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH TFSDYMKLEDKLFTELETKVYLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTD HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC NAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGHGTLPSALTNIDWQDMAGAVA CCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHHHHH LATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA HHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHC GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRER CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH LKGLPPILTFQSLTDDTVDTSAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKP HCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCCCHH YREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSLGLSWPKQIYSLSHVALPFPK HHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCC SDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP CCCEECCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVS CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH TFSDYMKLEDKLFTELETKVYLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTD HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC NAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGHGTLPSALTNIDWQDMAGAVA CCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHHHHH LATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA HHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHC GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRER CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH LKGLPPILTFQSLTDDTVDTSAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKP HCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCCCHH YREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSLGLSWPKQIYSLSHVALPFPK HHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCC SDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP CCCEECCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA