Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961584

Identifier: 157961584

GI number: 157961584

Start: 2138746

End: 2140185

Strand: Direct

Name: 157961584

Synonym: Spea_1760

Alternate gene names: NA

Gene position: 2138746-2140185 (Clockwise)

Preceding gene: 157961582

Following gene: 157961586

Centisome position: 41.33

GC content: 45.49

Gene sequence:

>1440_bases
ATGAAAACCATTATTATTGGGTCGACAAAACACCTAGCTTTTGCCCTATTTTACGCCTCTTTAGGAACCTTTATTGCATT
AATTGCGATGGCTGTTTGGTTTCTTAATTCACGCCCCGATCTGTCGATTTGGCACACAACCAAATTAACCTCTGAATACC
GCGCACAAAGTGAAGTTAGCACTTTTTCTGACTATATGAAGCTTGAAGATAAGCTGTTCACTGAGCTAGAGACTAAGGTT
TATCTTGAACCATCAGAGCCTCAGCCTTTCGATATTCTAAACCGTTATGTGCATGGCAGCTATTCTGATCCTGGTCATTG
GACACAGGATTGGAATCGCAGTTATGAATGGCCAACAGATAATGCTGAATTCGGGGTACTTTTACTCCATGGCATGTCTG
ACTCTCCCTATGCCTTGTCGCATTTCGCTAACCACTATAAAGACAGGGCGCATATTTTAGGACTTAGGCTACCGGGGCAT
GGCACCTTACCATCGGCGTTAACGAATATCGATTGGCAAGATATGGCGGGAGCAGTGGCTCTGGCTACAAGGCATATGAA
GCAAGTGTTAGGTGAAAAGCCTTTGTATTTAATTGGTTTCTCTACGGGGGCGGCATTGGCTCTTAATCATGAACTTGAGC
GCATAGCTGCCAATAAGGACGCTGATTACTCGGCCATGGTGCTGATCTCTCCAGCCATAGGCTTACCAGCTGTTGCCGCT
GGAGCTAGGTGGCAAGCAAGACTTGGGATTGTACTGGGTTTAGATAAGCTGAGTTGGAATAGCATTCAAGCGGAATACGA
CCCTTTTAAGTATGGCTCTTTTGCCGTCAATGCTGGAGATGTGGTTTATCAACTTTCTATGCGTAACCATGATCTAATCC
TGCGACAGGGGCGGGAGCGACTCAAGGGGTTACCACCAATATTGACGTTTCAGTCACTTACCGATGATACCGTTGATACC
AGTGCCGTGATCAGTGCGCTATATGGTCAGTTACCCGATGCGGGCCACGAGTTAGTGTTATTTGATATCAACAGGACGAA
GGTGAATTTGAGTCTTATCTTGAATGATCCCTTGAAGCCGTATCGAGAGATGATGACACAAGGGGAATTTAACTATGAGT
TCACCTTAGTTGAAAACGAGAGCCTTGAGAGTCGGGATATTCAGGCTCGCCGATTAAATGACAATAGTACAAGCTCTCTT
GGGCTCAGCTGGCCAAAACAGATCTACTCCTTATCACATGTTGCGTTGCCATTTCCGAAAAGCGATGCGTTGTATGGCCC
TATTTGGAATAGCGATAAACCTCATATCCAGATAGGCACGGGAGCATCCCGGGGGGAGCGAGGCGTGATAAGTGTATCTG
CTAGTGAGATCTTAAGACAAAAGTGGAACCCATTTCATCCTTACATGCTAAGCAAAATGGATGAAGTGATAGTTCCTTAA

Upstream 100 bases:

>100_bases
TTATTTTTATTCAATTTTCAGCCTATCTTTACCGTTTCGGCGTAAGAGTGTGTAATTTATCTTATATTACATTGCTTGTT
TAGGGAGAAACGCAACGATT

Downstream 100 bases:

>100_bases
TTGTGGTACTTGTTTGGCTAACAAGCCTGATTAACGGTTAAAGATTAAAATGTGCGCTTTCGTAGTGGCTTCGCTACATT
TTGCTTGGCAGACCCATTTA

Product: lysophospholipase-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV
YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH
GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA
GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT
SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL
GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP

Sequences:

>Translated_479_residues
MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV
YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH
GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA
GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT
SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL
GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP
>Mature_479_residues
MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVSTFSDYMKLEDKLFTELETKV
YLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTDNAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGH
GTLPSALTNIDWQDMAGAVALATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA
GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRERLKGLPPILTFQSLTDDTVDT
SAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKPYREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSL
GLSWPKQIYSLSHVALPFPKSDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53690; Mature: 53690

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVS
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
TFSDYMKLEDKLFTELETKVYLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTD
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC
NAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGHGTLPSALTNIDWQDMAGAVA
CCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHHHHH
LATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA
HHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHC
GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRER
CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH
LKGLPPILTFQSLTDDTVDTSAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKP
HCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCCCHH
YREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSLGLSWPKQIYSLSHVALPFPK
HHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCC
SDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP
CCCEECCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTIIIGSTKHLAFALFYASLGTFIALIAMAVWFLNSRPDLSIWHTTKLTSEYRAQSEVS
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
TFSDYMKLEDKLFTELETKVYLEPSEPQPFDILNRYVHGSYSDPGHWTQDWNRSYEWPTD
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC
NAEFGVLLLHGMSDSPYALSHFANHYKDRAHILGLRLPGHGTLPSALTNIDWQDMAGAVA
CCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHHHHH
LATRHMKQVLGEKPLYLIGFSTGAALALNHELERIAANKDADYSAMVLISPAIGLPAVAA
HHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHC
GARWQARLGIVLGLDKLSWNSIQAEYDPFKYGSFAVNAGDVVYQLSMRNHDLILRQGRER
CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH
LKGLPPILTFQSLTDDTVDTSAVISALYGQLPDAGHELVLFDINRTKVNLSLILNDPLKP
HCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCCCHH
YREMMTQGEFNYEFTLVENESLESRDIQARRLNDNSTSSLGLSWPKQIYSLSHVALPFPK
HHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHEEECCCC
SDALYGPIWNSDKPHIQIGTGASRGERGVISVSASEILRQKWNPFHPYMLSKMDEVIVP
CCCEECCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA