Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961125
Identifier: 157961125
GI number: 157961125
Start: 1581020
End: 1581322
Strand: Direct
Name: 157961125
Synonym: Spea_1297
Alternate gene names: NA
Gene position: 1581020-1581322 (Clockwise)
Preceding gene: 157961124
Following gene: 157961126
Centisome position: 30.55
GC content: 42.57
Gene sequence:
>303_bases ATGATAGCTAAATTAGTGAAATTGGCTGCAGCTGCAACTCTAGCACTCGGTATCTCAAGCGCATGGGCACAAGGTGTTAT GCATGAAGGTACTGTCATGGATACCATGAATGGCGGCGGTTATACCTACGTTCAGATTAAAGAAGCTGACAAGACTTTTT GGGCTGCAGGTCCACAGATTGAAGTTAAGAAAGGCGACACTGTTGTTGTTCAAGAGCAGATGTGGATGAACGATTTCAGC AGCAAAACTCTAAATCGTACTTTCGATGAGTTGTTATTTGTTGGCCGTATCGATAAAAAGTAA
Upstream 100 bases:
>100_bases TGGATATTAGCTAGCTTATACTTGTGACTAATTAGAGATTTATCAGCTATTGCATGTTTTAATACTTATGAATTGATAAC TTATTTAAAGGAAATTTCCG
Downstream 100 bases:
>100_bases TTGTCACTTTAACGCCATAAGCAGAACTGCTTGGCTTTAAAGAGTGAACTTTTAGAAAGAATGCTAAATGGCGTAGACTG AGTCTACGCCATTTTCTTTT
Product: NrfJ-like protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MIAKLVKLAAAATLALGISSAWAQGVMHEGTVMDTMNGGGYTYVQIKEADKTFWAAGPQIEVKKGDTVVVQEQMWMNDFS SKTLNRTFDELLFVGRIDKK
Sequences:
>Translated_100_residues MIAKLVKLAAAATLALGISSAWAQGVMHEGTVMDTMNGGGYTYVQIKEADKTFWAAGPQIEVKKGDTVVVQEQMWMNDFS SKTLNRTFDELLFVGRIDKK >Mature_100_residues MIAKLVKLAAAATLALGISSAWAQGVMHEGTVMDTMNGGGYTYVQIKEADKTFWAAGPQIEVKKGDTVVVQEQMWMNDFS SKTLNRTFDELLFVGRIDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11001; Mature: 11001
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKLVKLAAAATLALGISSAWAQGVMHEGTVMDTMNGGGYTYVQIKEADKTFWAAGPQI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCEEECCCCEE EVKKGDTVVVQEQMWMNDFSSKTLNRTFDELLFVGRIDKK EEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIAKLVKLAAAATLALGISSAWAQGVMHEGTVMDTMNGGGYTYVQIKEADKTFWAAGPQI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCEEECCCCEE EVKKGDTVVVQEQMWMNDFSSKTLNRTFDELLFVGRIDKK EEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA