Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is ypeB [C]
Identifier: 157961124
GI number: 157961124
Start: 1580588
End: 1580812
Strand: Direct
Name: ypeB [C]
Synonym: Spea_1296
Alternate gene names: 157961124
Gene position: 1580588-1580812 (Clockwise)
Preceding gene: 157961119
Following gene: 157961125
Centisome position: 30.55
GC content: 38.67
Gene sequence:
>225_bases ATGGATGAAAAACTTCTATTTGAAGCCGTTACTCAAAAGATGCCTTTTGGTAAATATGCAGGAAGGTATTTACTCGAACT ACCTGAACCTTATTTAGTCTGGTTCCATTCAAAAGGCTTCCCTGAAGGAAAACTGGGCCAGCAATTAGCGTTAATGTATG AGGTCAAGTTAAATGGTCTTGAAGGTATGTTGCAGCCTATATTAGATGAGGCAAAGCGTTCTTAA
Upstream 100 bases:
>100_bases ATCGTTGTTGCTGGCGCGAGTCAAAGTGCAGTATTTCTATGAGAACTTGATAGAATGTGGCGCTAGAATATTTTTTTGAT AATAATGAGGTTAATCTGTG
Downstream 100 bases:
>100_bases CTGGCTTTAGGTTGGTATTAGTCCATTTGAGCAATAAATCGACTGTAATTAATAAAGTTCCGTGATAGGGATTAAAATAC TTGGTTATGAGAGTTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS
Sequences:
>Translated_74_residues MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS >Mature_74_residues MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=68, Percent_Identity=45.5882352941176, Blast_Score=63, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8533; Mature: 8533
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGL CCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH EGMLQPILDEAKRS HHHHHHHHHHHCCC >Mature Secondary Structure MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGL CCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH EGMLQPILDEAKRS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA