Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ypeB [C]

Identifier: 157961124

GI number: 157961124

Start: 1580588

End: 1580812

Strand: Direct

Name: ypeB [C]

Synonym: Spea_1296

Alternate gene names: 157961124

Gene position: 1580588-1580812 (Clockwise)

Preceding gene: 157961119

Following gene: 157961125

Centisome position: 30.55

GC content: 38.67

Gene sequence:

>225_bases
ATGGATGAAAAACTTCTATTTGAAGCCGTTACTCAAAAGATGCCTTTTGGTAAATATGCAGGAAGGTATTTACTCGAACT
ACCTGAACCTTATTTAGTCTGGTTCCATTCAAAAGGCTTCCCTGAAGGAAAACTGGGCCAGCAATTAGCGTTAATGTATG
AGGTCAAGTTAAATGGTCTTGAAGGTATGTTGCAGCCTATATTAGATGAGGCAAAGCGTTCTTAA

Upstream 100 bases:

>100_bases
ATCGTTGTTGCTGGCGCGAGTCAAAGTGCAGTATTTCTATGAGAACTTGATAGAATGTGGCGCTAGAATATTTTTTTGAT
AATAATGAGGTTAATCTGTG

Downstream 100 bases:

>100_bases
CTGGCTTTAGGTTGGTATTAGTCCATTTGAGCAATAAATCGACTGTAATTAATAAAGTTCCGTGATAGGGATTAAAATAC
TTGGTTATGAGAGTTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS

Sequences:

>Translated_74_residues
MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS
>Mature_74_residues
MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGLEGMLQPILDEAKRS

Specific function: Unknown

COG id: COG3530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082098, Length=68, Percent_Identity=45.5882352941176, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8533; Mature: 8533

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGL
CCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH
EGMLQPILDEAKRS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDEKLLFEAVTQKMPFGKYAGRYLLELPEPYLVWFHSKGFPEGKLGQQLALMYEVKLNGL
CCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH
EGMLQPILDEAKRS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA