Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961092
Identifier: 157961092
GI number: 157961092
Start: 1534646
End: 1535215
Strand: Direct
Name: 157961092
Synonym: Spea_1264
Alternate gene names: NA
Gene position: 1534646-1535215 (Clockwise)
Preceding gene: 157961091
Following gene: 157961093
Centisome position: 29.66
GC content: 42.11
Gene sequence:
>570_bases ATGCAAGATAGCAAAATCGACTTAAGTGAGCTGGCTTATCTCACAGAGCTTTTTGACCTGTTTAATTCAGGGCGTCATCT TAATCGCTCGTCTGATGCGACGTTGTGGCATGAGCTTGAGCAAAATTCAGCACAATATCAGTGTTTATTTTCTAATTTGG GGTTCGAACTGTGCATTGATGGTCGAGGTTTTGCTTGGTTTCATGATGAAGAAGGCAGTCAGAACGTCAATAAGCAATCG CGCCAGTTAGCGTTATTGCTCATGGTTATTTTTGACTATCAGGCTGATTGTGGTCGCTCTTTTGGTCAGTTCTATCAGTG GACCATTGGGAGCGCGTTACTAGAAGGAGTCTACGAAAGGCATCAAGGATTACTGGATGCGGAAGAGTTGGACCAGGGTG CCTTAATAAAGATACTAGAAAATGCAGTACGGAAAGGTTTCGCTATCCAAGAAAATGATCACTGGCGTTTATTACCTTCT GTTTATCGATACCTAGATCATTTTGAAGCCATTACTGAACAAGCATCAAACAGTGGTGTAGCAACTTATGAGGGAGATGA ATCATGTTAA
Upstream 100 bases:
>100_bases TCTAATGTAGATACCACTGCGCTGAACACCGTATATGTAACTTATTACCCTCATGAAATAACTCTTTTAGATAGCTCAAC AGTTGTAAAGGAGAATGTAA
Downstream 100 bases:
>100_bases ATTATGGCTTTCAACGCCTAGCATTAATTGGCAGTGCAGGGTACCAAAGGGCTGAGTTACCTCTGGATGACTCTGTTTCC TTAATTGCGCCCAATAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MQDSKIDLSELAYLTELFDLFNSGRHLNRSSDATLWHELEQNSAQYQCLFSNLGFELCIDGRGFAWFHDEEGSQNVNKQS RQLALLLMVIFDYQADCGRSFGQFYQWTIGSALLEGVYERHQGLLDAEELDQGALIKILENAVRKGFAIQENDHWRLLPS VYRYLDHFEAITEQASNSGVATYEGDESC
Sequences:
>Translated_189_residues MQDSKIDLSELAYLTELFDLFNSGRHLNRSSDATLWHELEQNSAQYQCLFSNLGFELCIDGRGFAWFHDEEGSQNVNKQS RQLALLLMVIFDYQADCGRSFGQFYQWTIGSALLEGVYERHQGLLDAEELDQGALIKILENAVRKGFAIQENDHWRLLPS VYRYLDHFEAITEQASNSGVATYEGDESC >Mature_189_residues MQDSKIDLSELAYLTELFDLFNSGRHLNRSSDATLWHELEQNSAQYQCLFSNLGFELCIDGRGFAWFHDEEGSQNVNKQS RQLALLLMVIFDYQADCGRSFGQFYQWTIGSALLEGVYERHQGLLDAEELDQGALIKILENAVRKGFAIQENDHWRLLPS VYRYLDHFEAITEQASNSGVATYEGDESC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21647; Mature: 21647
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDSKIDLSELAYLTELFDLFNSGRHLNRSSDATLWHELEQNSAQYQCLFSNLGFELCID CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEC GRGFAWFHDEEGSQNVNKQSRQLALLLMVIFDYQADCGRSFGQFYQWTIGSALLEGVYER CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQGLLDAEELDQGALIKILENAVRKGFAIQENDHWRLLPSVYRYLDHFEAITEQASNSGV HCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC ATYEGDESC EECCCCCCC >Mature Secondary Structure MQDSKIDLSELAYLTELFDLFNSGRHLNRSSDATLWHELEQNSAQYQCLFSNLGFELCID CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEC GRGFAWFHDEEGSQNVNKQSRQLALLLMVIFDYQADCGRSFGQFYQWTIGSALLEGVYER CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQGLLDAEELDQGALIKILENAVRKGFAIQENDHWRLLPSVYRYLDHFEAITEQASNSGV HCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC ATYEGDESC EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA