Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961045
Identifier: 157961045
GI number: 157961045
Start: 1482595
End: 1483665
Strand: Direct
Name: 157961045
Synonym: Spea_1217
Alternate gene names: NA
Gene position: 1482595-1483665 (Clockwise)
Preceding gene: 157961044
Following gene: 157961046
Centisome position: 28.65
GC content: 46.31
Gene sequence:
>1071_bases ATGTCAGATAGTCATCAACACCAGCGCTCATTTGCTTCAGCAAATAGGGGACATGCGACTGAAGAGGCCATTTATACTCG TAGAGTATTGCGTTTCACCCTTGGGATAGGCCTTGCTGTTGCTGTGTCAGCCATTTGGGCCTGGCCGTTGGCCTTTATTG TGCCGGTATTTGTGGCTAAGTTTTTGGTTGATAGGCAAGAGCCCACAATACAGACAGTGTATGAGCTGCTTATCTCGATG ATTTGTACCATAGGCTTAGCTTGGTTGGTGAGCTTTGGCCCGACTCATTACCCTATGGTGTTATTGCCATTGCTTGCCAT GATGATGCTATGGGGCTATTACCTGTTTAGCGATCCTAAGTGGAATTTCTTTGCCACCATTTTTATTGTGGCGACTCTGC TGCTGCCCTACCTGAGTCTATTGCAGCCCGGTGCAGCGATAATGGTGGGCGTGGGATTGAGCTTTTCAGGCGTAGTTGCA GTCGCTATTTTCGCATTGCTACACGCCTTGCTTCCTGATCTGTCACCGAAGAAAGAGCAGTTAGCCGATGCCCAGCAGAG CCATGATGAGCGAACCCATGAGGCATTTCGTGCGCTAATTATCGCTTTCCCTGTGATCTGTTTTTTCTATTTTCTAGAGA TCTCAGGTGCACTGCTGACCATGATCTTTATTGCTATTTTGTCTTTGCAGGCTGCGGGGGCAAAAAGTATCAAGGTGAGC CTGTTTCTATTGGTGACTAATGGGATTGGTGGCGCGTTAGCCGTTGTGTTTTATAACTTACTCACCATAGTGCCCGAGAT CCAATTTTATATTGGCATGTCGATGTTAGCTGCCTTGTTCTTTGGCCAAAAAATCTATGCCGACCCGGCAAAAGCCCCTC TCTATGCGGGGATCTTATCTGCATTACTTGTGGTTGTGGGCTCTACAGCATCGTCGACCGATAAAGATGTGACAGTGAAT TTTTACCTGAGGATCTTGCAGCTATTTTTAGTGGGTGTTTACATGATTTTTGCCTCTTTCTTTTTAGAGTCCAGAGACTG GAAGTTCTTAAAGAAGCGTAACAGCTTATAA
Upstream 100 bases:
>100_bases CGCGTGGGTGGGCAGGTTGATGTAATTGTCTACACCAGTGACAGCAGTATCATTAATCTATTTGGTAAATTCTGGATCCG CCTCGTGAGCTGGTTCTCTT
Downstream 100 bases:
>100_bases GTCATTGTGGTGTCAGCAAAGGGCAATTAATTAGTTGTGATAAGTAATAGTATGGACACCATATTTACAGCAAGTGCAGT TAGTAGCGCGGCTGTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSDSHQHQRSFASANRGHATEEAIYTRRVLRFTLGIGLAVAVSAIWAWPLAFIVPVFVAKFLVDRQEPTIQTVYELLISM ICTIGLAWLVSFGPTHYPMVLLPLLAMMMLWGYYLFSDPKWNFFATIFIVATLLLPYLSLLQPGAAIMVGVGLSFSGVVA VAIFALLHALLPDLSPKKEQLADAQQSHDERTHEAFRALIIAFPVICFFYFLEISGALLTMIFIAILSLQAAGAKSIKVS LFLLVTNGIGGALAVVFYNLLTIVPEIQFYIGMSMLAALFFGQKIYADPAKAPLYAGILSALLVVVGSTASSTDKDVTVN FYLRILQLFLVGVYMIFASFFLESRDWKFLKKRNSL
Sequences:
>Translated_356_residues MSDSHQHQRSFASANRGHATEEAIYTRRVLRFTLGIGLAVAVSAIWAWPLAFIVPVFVAKFLVDRQEPTIQTVYELLISM ICTIGLAWLVSFGPTHYPMVLLPLLAMMMLWGYYLFSDPKWNFFATIFIVATLLLPYLSLLQPGAAIMVGVGLSFSGVVA VAIFALLHALLPDLSPKKEQLADAQQSHDERTHEAFRALIIAFPVICFFYFLEISGALLTMIFIAILSLQAAGAKSIKVS LFLLVTNGIGGALAVVFYNLLTIVPEIQFYIGMSMLAALFFGQKIYADPAKAPLYAGILSALLVVVGSTASSTDKDVTVN FYLRILQLFLVGVYMIFASFFLESRDWKFLKKRNSL >Mature_355_residues SDSHQHQRSFASANRGHATEEAIYTRRVLRFTLGIGLAVAVSAIWAWPLAFIVPVFVAKFLVDRQEPTIQTVYELLISMI CTIGLAWLVSFGPTHYPMVLLPLLAMMMLWGYYLFSDPKWNFFATIFIVATLLLPYLSLLQPGAAIMVGVGLSFSGVVAV AIFALLHALLPDLSPKKEQLADAQQSHDERTHEAFRALIIAFPVICFFYFLEISGALLTMIFIAILSLQAAGAKSIKVSL FLLVTNGIGGALAVVFYNLLTIVPEIQFYIGMSMLAALFFGQKIYADPAKAPLYAGILSALLVVVGSTASSTDKDVTVNF YLRILQLFLVGVYMIFASFFLESRDWKFLKKRNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39402; Mature: 39271
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSHQHQRSFASANRGHATEEAIYTRRVLRFTLGIGLAVAVSAIWAWPLAFIVPVFVAK CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVDRQEPTIQTVYELLISMICTIGLAWLVSFGPTHYPMVLLPLLAMMMLWGYYLFSDPK HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC WNFFATIFIVATLLLPYLSLLQPGAAIMVGVGLSFSGVVAVAIFALLHALLPDLSPKKEQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH LADAQQSHDERTHEAFRALIIAFPVICFFYFLEISGALLTMIFIAILSLQAAGAKSIKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE LFLLVTNGIGGALAVVFYNLLTIVPEIQFYIGMSMLAALFFGQKIYADPAKAPLYAGILS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH ALLVVVGSTASSTDKDVTVNFYLRILQLFLVGVYMIFASFFLESRDWKFLKKRNSL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure SDSHQHQRSFASANRGHATEEAIYTRRVLRFTLGIGLAVAVSAIWAWPLAFIVPVFVAK CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVDRQEPTIQTVYELLISMICTIGLAWLVSFGPTHYPMVLLPLLAMMMLWGYYLFSDPK HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC WNFFATIFIVATLLLPYLSLLQPGAAIMVGVGLSFSGVVAVAIFALLHALLPDLSPKKEQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH LADAQQSHDERTHEAFRALIIAFPVICFFYFLEISGALLTMIFIAILSLQAAGAKSIKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE LFLLVTNGIGGALAVVFYNLLTIVPEIQFYIGMSMLAALFFGQKIYADPAKAPLYAGILS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH ALLVVVGSTASSTDKDVTVNFYLRILQLFLVGVYMIFASFFLESRDWKFLKKRNSL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA