Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961041
Identifier: 157961041
GI number: 157961041
Start: 1476569
End: 1477135
Strand: Direct
Name: 157961041
Synonym: Spea_1213
Alternate gene names: NA
Gene position: 1476569-1477135 (Clockwise)
Preceding gene: 157961040
Following gene: 157961043
Centisome position: 28.54
GC content: 46.56
Gene sequence:
>567_bases ATGACAGATAAAGAGCATGAAGCAGTTGAGGCTGAAATTAAGTCGCTTTATCAACAAATCGATAAAGAGCAGCCTTCGAG TCAGCTAGATGAACAGATCTTAACTATGGCCCGTAGTCGTACAGCTAAGCCTCAGCAGAGCCAGTCTTTTTGGCGTAAAT ACCGCTGGCCTTTATCTTCAGCCGCCTCCGTTTTCGTGGTGGTAACCCTGTTTGTGATCAACCCTGCTATGAAAAGTGGC GATGTATTAGAGCAAGGTGAGCCAGTGATGATGTCATCTCCGCCTAAGCCACAGATGATGCGCTCTATGGATAGCCCTAA CCAAGTGGCAGAACATTTGGATGAGCAGACTCCTCAGACAGTGCAGGGCAATGAGTCTAAGTCTGCAGATCCCGATTTAA CTGCACAACTGGATAATATTGAGCAGTTACTTCGAGATAAGGACATTACAGAGGCTAATCGCTTACTAAAATTATTGGCC GAGCAGCAGCCGCAGCTATTGGAGCCGAGCCATCCACTGAATGCAAGGTATATAGCATTGAAAAAGGCGCTGATGTCAGG GCATTAA
Upstream 100 bases:
>100_bases GATATTGCTGGAGCGACATTAGAAGCAACAAAGAGCCGTATTCGTTATGCCTATAAGGGGCTTAAAGATTGCGTAGACTT AAAATGGCAAGGAGCTGAGC
Downstream 100 bases:
>100_bases CAAGCCGCACAGATGGCACTGAGTGACGCTAACAATATCTAAGCCCGCATTTGCGGGCTTTTTTTTGGGTTATATTTTAC TAAAAGTTTTGCTTAGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTDKEHEAVEAEIKSLYQQIDKEQPSSQLDEQILTMARSRTAKPQQSQSFWRKYRWPLSSAASVFVVVTLFVINPAMKSG DVLEQGEPVMMSSPPKPQMMRSMDSPNQVAEHLDEQTPQTVQGNESKSADPDLTAQLDNIEQLLRDKDITEANRLLKLLA EQQPQLLEPSHPLNARYIALKKALMSGH
Sequences:
>Translated_188_residues MTDKEHEAVEAEIKSLYQQIDKEQPSSQLDEQILTMARSRTAKPQQSQSFWRKYRWPLSSAASVFVVVTLFVINPAMKSG DVLEQGEPVMMSSPPKPQMMRSMDSPNQVAEHLDEQTPQTVQGNESKSADPDLTAQLDNIEQLLRDKDITEANRLLKLLA EQQPQLLEPSHPLNARYIALKKALMSGH >Mature_187_residues TDKEHEAVEAEIKSLYQQIDKEQPSSQLDEQILTMARSRTAKPQQSQSFWRKYRWPLSSAASVFVVVTLFVINPAMKSGD VLEQGEPVMMSSPPKPQMMRSMDSPNQVAEHLDEQTPQTVQGNESKSADPDLTAQLDNIEQLLRDKDITEANRLLKLLAE QQPQLLEPSHPLNARYIALKKALMSGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21237; Mature: 21106
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKEHEAVEAEIKSLYQQIDKEQPSSQLDEQILTMARSRTAKPQQSQSFWRKYRWPLSS CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH AASVFVVVTLFVINPAMKSGDVLEQGEPVMMSSPPKPQMMRSMDSPNQVAEHLDEQTPQT HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCC VQGNESKSADPDLTAQLDNIEQLLRDKDITEANRLLKLLAEQQPQLLEPSHPLNARYIAL CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH KKALMSGH HHHHHCCC >Mature Secondary Structure TDKEHEAVEAEIKSLYQQIDKEQPSSQLDEQILTMARSRTAKPQQSQSFWRKYRWPLSS CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH AASVFVVVTLFVINPAMKSGDVLEQGEPVMMSSPPKPQMMRSMDSPNQVAEHLDEQTPQT HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCC VQGNESKSADPDLTAQLDNIEQLLRDKDITEANRLLKLLAEQQPQLLEPSHPLNARYIAL CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH KKALMSGH HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA