Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961037
Identifier: 157961037
GI number: 157961037
Start: 1473579
End: 1474019
Strand: Direct
Name: 157961037
Synonym: Spea_1209
Alternate gene names: NA
Gene position: 1473579-1474019 (Clockwise)
Preceding gene: 157961036
Following gene: 157961038
Centisome position: 28.48
GC content: 46.49
Gene sequence:
>441_bases TTGGCGATAAAGGGCTTCAAAAGCGTATTAGGCATAGCTGCATTATTATTGATTGTATCGGGTTGTGCTTCACAATCCGA TACCGCTAATCAGTGTGGCATTGTTGCGACTTATATGGAGCCCGACCGTGAGGCCGATACTTATCGAGTGGTAGTGACCC ATCTCGATGGAAAACCGGTAATTTCTCAGCCTAACTACCGTTTGAGTGTGGGAGAACATACCTTTACGGTTGCCGAGTTG ATTGATGCGCCGAGCTTAATGGTCAAGCTTGCTGCTCGCACGCCTAAACAACTCAAGGTGAATATTGCCTATAACCAGCG CTACCATATAGGCGCTAAACTGAATACCGACAAGGTATACAGAGGCAATGACAGTAATTTTTGGCAGCCTGAAGTGTGGC AACAAGAAGCCCACGATTGCGAATTAATCCCTGAGCTATAG
Upstream 100 bases:
>100_bases AGCAAGATGCTGTCGAGTCGCTAGAGAAACAGGCGTATCTAGAGTCGCAACCTAGCGTCAGCTTCGATCAGTTTTTAGTC GATTACTTTAAGGTTTAGTT
Downstream 100 bases:
>100_bases CCACGCTAGTCTATCTTTTCTCTAGTTGATTTATAACACATTTCCCTAAACGCTTAATTGCATCTTTTGCCTATCAATGT GACACTAGCGCTTTGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAIKGFKSVLGIAALLLIVSGCASQSDTANQCGIVATYMEPDREADTYRVVVTHLDGKPVISQPNYRLSVGEHTFTVAEL IDAPSLMVKLAARTPKQLKVNIAYNQRYHIGAKLNTDKVYRGNDSNFWQPEVWQQEAHDCELIPEL
Sequences:
>Translated_146_residues MAIKGFKSVLGIAALLLIVSGCASQSDTANQCGIVATYMEPDREADTYRVVVTHLDGKPVISQPNYRLSVGEHTFTVAEL IDAPSLMVKLAARTPKQLKVNIAYNQRYHIGAKLNTDKVYRGNDSNFWQPEVWQQEAHDCELIPEL >Mature_145_residues AIKGFKSVLGIAALLLIVSGCASQSDTANQCGIVATYMEPDREADTYRVVVTHLDGKPVISQPNYRLSVGEHTFTVAELI DAPSLMVKLAARTPKQLKVNIAYNQRYHIGAKLNTDKVYRGNDSNFWQPEVWQQEAHDCELIPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16218; Mature: 16086
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKGFKSVLGIAALLLIVSGCASQSDTANQCGIVATYMEPDREADTYRVVVTHLDGKPV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCC ISQPNYRLSVGEHTFTVAELIDAPSLMVKLAARTPKQLKVNIAYNQRYHIGAKLNTDKVY CCCCCEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCEEEECCEECCCCEE RGNDSNFWQPEVWQQEAHDCELIPEL ECCCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure AIKGFKSVLGIAALLLIVSGCASQSDTANQCGIVATYMEPDREADTYRVVVTHLDGKPV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCC ISQPNYRLSVGEHTFTVAELIDAPSLMVKLAARTPKQLKVNIAYNQRYHIGAKLNTDKVY CCCCCEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCEEEECCEECCCCEE RGNDSNFWQPEVWQQEAHDCELIPEL ECCCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA