| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mviN [H]
Identifier: 157960909
GI number: 157960909
Start: 1308099
End: 1309658
Strand: Direct
Name: mviN [H]
Synonym: Spea_1081
Alternate gene names: 157960909
Gene position: 1308099-1309658 (Clockwise)
Preceding gene: 157960907
Following gene: 157960910
Centisome position: 25.28
GC content: 44.29
Gene sequence:
>1560_bases TTGAGCAAGAAGTTAGTGAAGTCAGGCATTATCGTGAGTGCTATGACGTTGATTTCCCGTGTTTTAGGTTTAGTTCGAGA TGTTGTTATAGCGAACCTTTTGGGAGCAGGAAGTAGTGCGGATGTATTTTTCTTTGCGAATAAAATTCCCAACTTTTTAA GACGCCTGTTTGCCGAGGGCGCTTTTGCACAAGCATTTGTCCCCGTTTTAACTGAGTACCAAGAAAAAAACACCAGTGAA GAGGTCAGAGAGCTGATTTCCAAAGTCGCAGGTACCTTGGGGATACTGGTCACTGTCGTGACTTTAGTCGGGGTAATTGC TTCTCCTGTCCTAGCTGCGCTGTTCGGCGGAGGCTGGTTTTTAGCCTGGGTGAATGACGAGCCTAATGGAGCAAAGTTTG AACTAGCCTCCTTGATGTTGAAGATTACCTTCCCTTATTTGTGGTTTATCACCTTTACCGCTTTAGCGGGATCGATTTTA AATACCCGTGGTCGTTTTGCAGTCTCAGCCTTTACCCCGGTGTTTTTAAACATCGCTATTATCGCTGCAGCCATCTATCT TGCGCCAAATCTGAGTCAGCCCGAAATCGGCTTGGCTTGTGGTGTGTTTTTAGGTGGTTTAATTCAGTTTTTGTTCCAAA TACCTTTCTTAATGAAAGAAAAGGCGGTGGTTAAGCCAAGCTGGGGCTGGAATCATCCTGGTGTGACCAAAATTCGTACC TTAATGATCCCGGCACTGTTTGGTGTATCTGTCTCACAAATAAACCTGCTACTCGACACGTTTATTGCAAGCTTCTTAAT GACGGGGTCAATCAGTTGGCTATATTACTCAGACCGATTACTCGAGTTTCCGCTCGGTTTATTTGGTATTGCTATCGCAA CCGTTATATTACCAGCGTTATCTAAGCGTCATGTGAATGCTGAAAGTGTTGAGTTTGCAAAAACTATGGACTGGGGCGTA AAAGCGATAATCTTATTAGGCCTACCAGCAATGTGCGGCCTTATCATGTTGGCTAAGCCTATGCTGATGGTGCTATTTAT GCGCGGTGCATTCAGTTATAACGATGTTGAAATGGCATCTTATAGTTTGATGGCGTATGGCAGTGGCCTTCTCAGCTTTA TGTTGATAAAAATCTTGGCCCCTGGCTATTACTCCAGACAAGATACCAGAACGCCAGTTCGCTACGGGATTATTGCTATG GTGAGTAATATGGTGTTTAACCTTATTTTTGCGATCCCATTCGGTTATGTCGGCTTAGCTATTGCGACTTCGATGTCGGC GCTGCTTAACGCAGGTCTATTGTATCGCGGGCTGCATAAGGCAAATGTCTATCGAGTCAACAAGGCTACCGTGATGTTTT TAGTTAAATCAGCAATAGCGGCTGGGGTAATGTTACTGGTATTGTTTCAGTTCGACCCGACAACACCGCAGTGGCTTGAT TTATCCTTTGTTGAACGCAGTTATACCTTGGCTAAATTGATTGTATTTGCAGCAGTCGCATACTTTATTTGCCTAGTTTG CCTCGGAATTCGTCCTTGGAAGATGAAAGCTGCAGTTTGA
Upstream 100 bases:
>100_bases CCAATTCTAGCAGGTATTACCATGAGACAATAGAGGCAATACCAATTTTTACGTGATATTGCCTAAAGTAATTTAGCTCT ATTTCGGAGCAGGGGGCGTT
Downstream 100 bases:
>100_bases GTGCTGATTATAAAGGCTAGCTGGTATATAATCCGCCCATTTACTCTCATGTGTCGTGTAAGATAATGGAATTAATCCGC GGTATTCATAACATTTTGCC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MSKKLVKSGIIVSAMTLISRVLGLVRDVVIANLLGAGSSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKNTSE EVRELISKVAGTLGILVTVVTLVGVIASPVLAALFGGGWFLAWVNDEPNGAKFELASLMLKITFPYLWFITFTALAGSIL NTRGRFAVSAFTPVFLNIAIIAAAIYLAPNLSQPEIGLACGVFLGGLIQFLFQIPFLMKEKAVVKPSWGWNHPGVTKIRT LMIPALFGVSVSQINLLLDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSKRHVNAESVEFAKTMDWGV KAIILLGLPAMCGLIMLAKPMLMVLFMRGAFSYNDVEMASYSLMAYGSGLLSFMLIKILAPGYYSRQDTRTPVRYGIIAM VSNMVFNLIFAIPFGYVGLAIATSMSALLNAGLLYRGLHKANVYRVNKATVMFLVKSAIAAGVMLLVLFQFDPTTPQWLD LSFVERSYTLAKLIVFAAVAYFICLVCLGIRPWKMKAAV
Sequences:
>Translated_519_residues MSKKLVKSGIIVSAMTLISRVLGLVRDVVIANLLGAGSSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKNTSE EVRELISKVAGTLGILVTVVTLVGVIASPVLAALFGGGWFLAWVNDEPNGAKFELASLMLKITFPYLWFITFTALAGSIL NTRGRFAVSAFTPVFLNIAIIAAAIYLAPNLSQPEIGLACGVFLGGLIQFLFQIPFLMKEKAVVKPSWGWNHPGVTKIRT LMIPALFGVSVSQINLLLDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSKRHVNAESVEFAKTMDWGV KAIILLGLPAMCGLIMLAKPMLMVLFMRGAFSYNDVEMASYSLMAYGSGLLSFMLIKILAPGYYSRQDTRTPVRYGIIAM VSNMVFNLIFAIPFGYVGLAIATSMSALLNAGLLYRGLHKANVYRVNKATVMFLVKSAIAAGVMLLVLFQFDPTTPQWLD LSFVERSYTLAKLIVFAAVAYFICLVCLGIRPWKMKAAV >Mature_518_residues SKKLVKSGIIVSAMTLISRVLGLVRDVVIANLLGAGSSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKNTSEE VRELISKVAGTLGILVTVVTLVGVIASPVLAALFGGGWFLAWVNDEPNGAKFELASLMLKITFPYLWFITFTALAGSILN TRGRFAVSAFTPVFLNIAIIAAAIYLAPNLSQPEIGLACGVFLGGLIQFLFQIPFLMKEKAVVKPSWGWNHPGVTKIRTL MIPALFGVSVSQINLLLDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSKRHVNAESVEFAKTMDWGVK AIILLGLPAMCGLIMLAKPMLMVLFMRGAFSYNDVEMASYSLMAYGSGLLSFMLIKILAPGYYSRQDTRTPVRYGIIAMV SNMVFNLIFAIPFGYVGLAIATSMSALLNAGLLYRGLHKANVYRVNKATVMFLVKSAIAAGVMLLVLFQFDPTTPQWLDL SFVERSYTLAKLIVFAAVAYFICLVCLGIRPWKMKAAV
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=508, Percent_Identity=40.3543307086614, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56679; Mature: 56547
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLVKSGIIVSAMTLISRVLGLVRDVVIANLLGAGSSADVFFFANKIPNFLRRLFAEG CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCC AFAQAFVPVLTEYQEKNTSEEVRELISKVAGTLGILVTVVTLVGVIASPVLAALFGGGWF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LAWVNDEPNGAKFELASLMLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNIAI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH IAAAIYLAPNLSQPEIGLACGVFLGGLIQFLFQIPFLMKEKAVVKPSWGWNHPGVTKIRT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHH LMIPALFGVSVSQINLLLDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH SKRHVNAESVEFAKTMDWGVKAIILLGLPAMCGLIMLAKPMLMVLFMRGAFSYNDVEMAS HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YSLMAYGSGLLSFMLIKILAPGYYSRQDTRTPVRYGIIAMVSNMVFNLIFAIPFGYVGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATSMSALLNAGLLYRGLHKANVYRVNKATVMFLVKSAIAAGVMLLVLFQFDPTTPQWLD HHHHHHHHHHHHHHHHCHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSFVERSYTLAKLIVFAAVAYFICLVCLGIRPWKMKAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKKLVKSGIIVSAMTLISRVLGLVRDVVIANLLGAGSSADVFFFANKIPNFLRRLFAEG CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCC AFAQAFVPVLTEYQEKNTSEEVRELISKVAGTLGILVTVVTLVGVIASPVLAALFGGGWF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LAWVNDEPNGAKFELASLMLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNIAI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH IAAAIYLAPNLSQPEIGLACGVFLGGLIQFLFQIPFLMKEKAVVKPSWGWNHPGVTKIRT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHH LMIPALFGVSVSQINLLLDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH SKRHVNAESVEFAKTMDWGVKAIILLGLPAMCGLIMLAKPMLMVLFMRGAFSYNDVEMAS HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YSLMAYGSGLLSFMLIKILAPGYYSRQDTRTPVRYGIIAMVSNMVFNLIFAIPFGYVGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATSMSALLNAGLLYRGLHKANVYRVNKATVMFLVKSAIAAGVMLLVLFQFDPTTPQWLD HHHHHHHHHHHHHHHHCHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSFVERSYTLAKLIVFAAVAYFICLVCLGIRPWKMKAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9457888; 10952301 [H]