Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960899

Identifier: 157960899

GI number: 157960899

Start: 1295548

End: 1296099

Strand: Direct

Name: 157960899

Synonym: Spea_1071

Alternate gene names: NA

Gene position: 1295548-1296099 (Clockwise)

Preceding gene: 157960897

Following gene: 157960905

Centisome position: 25.04

GC content: 40.76

Gene sequence:

>552_bases
ATGGAGATGACTATGCTAGCGAGACTCATGCACGACCATAAGCATATTGCTATTTTGCTTAAGGTTTTAAAGGCTAAATA
TACTAAATTAGCCGCAGGTGAAGCGATAAACTATAACGTGGTACGAGATATAGTGGAATATATGCAAAGTTATGCAGAGC
ATAGCCACCATCCATTGGAAGAAGTGATTTCTGAATTTTACTGGAACAAGCTTGGCCGCTCACACATCAATGAAAAGCTG
ACTTCTGAACATTTTAAATTAGGTGAAGCCTCTACTTCGCTTATGGCGACGTTAAACCTGATTTTAAACGATATTGTGGT
ATCGAAAGAGCAGCTGGTTGCCGATCTAGAAAGTTATGTTCGAATGCAGCAATCACACATGGAATATGAGGAGTCAACTG
TATTTCCTAAGTGGGATGAAGTGATTACCGATGAAGACTGGCAGAAGGTAGCGGCTCTGTGCGACGCGCGTTTGATTGAT
GACCCTTTGTTTAGTGATAGTGATAAAGTGTTGTTTGAAGAGCTTAGAGAGTACTTGGAAACGGCAGATTAA

Upstream 100 bases:

>100_bases
ATAGCTTGATCTCTATCATTAACCCGACTGTAAGTGGTTTGTTATGTTGGGCGTTATTTATACTGTTTACTAATATAGAT
GATAGTGGGGGCGAATTAGG

Downstream 100 bases:

>100_bases
CTAATTACGACTTGTATGATAAAACTAAAAAAGAGCGCTTTAGCGCTCTTTTTGTTTCAATCACATCAGGAGGGTATCTA
GCTCGCCACTGAAATTATTA

Product: hemerythrin HHE cation-binding domain-containing protein

Products: NA

Alternate protein names: Hemerythrin Family Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEMTMLARLMHDHKHIAILLKVLKAKYTKLAAGEAINYNVVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRSHINEKL
TSEHFKLGEASTSLMATLNLILNDIVVSKEQLVADLESYVRMQQSHMEYEESTVFPKWDEVITDEDWQKVAALCDARLID
DPLFSDSDKVLFEELREYLETAD

Sequences:

>Translated_183_residues
MEMTMLARLMHDHKHIAILLKVLKAKYTKLAAGEAINYNVVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRSHINEKL
TSEHFKLGEASTSLMATLNLILNDIVVSKEQLVADLESYVRMQQSHMEYEESTVFPKWDEVITDEDWQKVAALCDARLID
DPLFSDSDKVLFEELREYLETAD
>Mature_183_residues
MEMTMLARLMHDHKHIAILLKVLKAKYTKLAAGEAINYNVVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRSHINEKL
TSEHFKLGEASTSLMATLNLILNDIVVSKEQLVADLESYVRMQQSHMEYEESTVFPKWDEVITDEDWQKVAALCDARLID
DPLFSDSDKVLFEELREYLETAD

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21321; Mature: 21321

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTMLARLMHDHKHIAILLKVLKAKYTKLAAGEAINYNVVRDIVEYMQSYAEHSHHPLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
EVISEFYWNKLGRSHINEKLTSEHFKLGEASTSLMATLNLILNDIVVSKEQLVADLESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMQQSHMEYEESTVFPKWDEVITDEDWQKVAALCDARLIDDPLFSDSDKVLFEELREYLE
HHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TAD
CCC
>Mature Secondary Structure
MEMTMLARLMHDHKHIAILLKVLKAKYTKLAAGEAINYNVVRDIVEYMQSYAEHSHHPLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
EVISEFYWNKLGRSHINEKLTSEHFKLGEASTSLMATLNLILNDIVVSKEQLVADLESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMQQSHMEYEESTVFPKWDEVITDEDWQKVAALCDARLIDDPLFSDSDKVLFEELREYLE
HHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TAD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA