Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960885

Identifier: 157960885

GI number: 157960885

Start: 1280747

End: 1281085

Strand: Direct

Name: 157960885

Synonym: Spea_1057

Alternate gene names: NA

Gene position: 1280747-1281085 (Clockwise)

Preceding gene: 157960884

Following gene: 157960886

Centisome position: 24.75

GC content: 48.38

Gene sequence:

>339_bases
ATGGCATCAACATTACATTCTCAACCGCTAGCACTAGAAGACAGGAGCCTTGCTCACCTTTTGTATGGGCTTATGGCCTG
CTTTCCACTTTTTCTCGTTCCCGCAGCGCTCAGCCTGCTCATTAATGTCTACCAGCCACAACAAGATTCAAATAGCACTA
TGGCAGTGCATTTGCGTTGGCAGCGCTGGTCTATCGTCGGTCTGTTTGCTGTTATTCTCGTTGGTTATCTAGCTAGCCCG
CAGTGGCTCAGTACAACACTCTATGTTGCTGGTGCAGTGTGGTTTGGTGGCCGAGTGTTTAAAGGCTGGTTGAGCCTAAT
TGAAGGCCGAAAAATCTAA

Upstream 100 bases:

>100_bases
CGTAAGGTTAAAGACAGGCCGCGATGGAAATGCGCCTGTCTTTTTATACCAAGTTATACCAAGTCTCTATCCTCAGGTAT
TTTTTCTCTATGGAGTGCGC

Downstream 100 bases:

>100_bases
CCCTACATATCCTAATACTATATTTAGAATCAGACTGAGAACCGCCTGTGACTAGTTACGAAATCCTATGCCTGCTATCT
GCACTGTCTTTAGTCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MASTLHSQPLALEDRSLAHLLYGLMACFPLFLVPAALSLLINVYQPQQDSNSTMAVHLRWQRWSIVGLFAVILVGYLASP
QWLSTTLYVAGAVWFGGRVFKGWLSLIEGRKI

Sequences:

>Translated_112_residues
MASTLHSQPLALEDRSLAHLLYGLMACFPLFLVPAALSLLINVYQPQQDSNSTMAVHLRWQRWSIVGLFAVILVGYLASP
QWLSTTLYVAGAVWFGGRVFKGWLSLIEGRKI
>Mature_111_residues
ASTLHSQPLALEDRSLAHLLYGLMACFPLFLVPAALSLLINVYQPQQDSNSTMAVHLRWQRWSIVGLFAVILVGYLASPQ
WLSTTLYVAGAVWFGGRVFKGWLSLIEGRKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12489; Mature: 12358

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTLHSQPLALEDRSLAHLLYGLMACFPLFLVPAALSLLINVYQPQQDSNSTMAVHLRW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
QRWSIVGLFAVILVGYLASPQWLSTTLYVAGAVWFGGRVFKGWLSLIEGRKI
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASTLHSQPLALEDRSLAHLLYGLMACFPLFLVPAALSLLINVYQPQQDSNSTMAVHLRW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
QRWSIVGLFAVILVGYLASPQWLSTTLYVAGAVWFGGRVFKGWLSLIEGRKI
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA