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The map label for this gene is recO [H]

Identifier: 157960867

GI number: 157960867

Start: 1261937

End: 1262626

Strand: Direct

Name: recO [H]

Synonym: Spea_1039

Alternate gene names: 157960867

Gene position: 1261937-1262626 (Clockwise)

Preceding gene: 157960866

Following gene: 157960868

Centisome position: 24.39

GC content: 46.38

Gene sequence:

>690_bases
ATGGAACGTGGCTACGTTCTTCATAGCAGGCATTTTCGTGATGGTAGCGTCATCGTTAACTTACTGGTAGATGGTAAGGG
GCGGGTCGATGCTGTTGCACGCCTAGGCGGCGCTAAAAACTCCATTCGTAGCATTATTCAACCTTTCCAACCGATTATCT
TTCAGTTGCATGGCAAAACAGATCTTAAAAACCTCAAGCAGGTTGAAGCTGCTAGTCCCGCAGTACCGTTAACAGGCGAC
TGCTTGTATTCGGGCCTCTATCTTAATGAGTTGTTGATCCGTTGTTTATCGGTGCAGCACAGCGCCGAGAACCTCTTTTT
TGATTATCATCGCACGTTAATCGCCATGGCGACTGAGTTTAATCAAAGTCAATTAAGATACTTTGAGCATGCATTGCTGC
TGGAGTTGGGAACCATGCCATCTCTGGATTTTGACCCGAGTGATGCGCCAATAACGGCGAGTGGATTTTATCGCTTAGAG
CAAGACCACGGCTTTACCCCTGTTATCGCGACAGCCTTTAATCAGCATAAATTTTTTACTGGCGAGATGTTGGTCGCTTT
GAACCAGCGTACGCTGACGACAGAGCACTTTTTAGAAGCTAAAAAGCTGATGCGTCAGTTACTCGCTCCTGTACTGGGAG
ATAAGCCACTGCATTCAAGAACCTTGTTCGCTAAGAAACCTAAACCTTAG

Upstream 100 bases:

>100_bases
TAGCCAGCATATTAATGAATCATCCCGTTTTCTTTTTACAAACGGCTTATTGGTTTTATGATGGTATTTGGTACTATTTA
GTAATCGGAATGAGATAACC

Downstream 100 bases:

>100_bases
GCCGCAACAGGTTAAAGTCACTCACAATAAATTCACCACAGTTTAGTCGGCGATACTGGCTAAACCGCAACCCTATCAGT
ACAATATCGTCTTTTATATC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKTDLKNLKQVEAASPAVPLTGD
CLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEFNQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLE
QDHGFTPVIATAFNQHKFFTGEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP

Sequences:

>Translated_229_residues
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKTDLKNLKQVEAASPAVPLTGD
CLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEFNQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLE
QDHGFTPVIATAFNQHKFFTGEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP
>Mature_229_residues
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKTDLKNLKQVEAASPAVPLTGD
CLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEFNQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLE
QDHGFTPVIATAFNQHKFFTGEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=230, Percent_Identity=38.695652173913, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 25761; Mature: 25761

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKT
CCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCC
DLKNLKQVEAASPAVPLTGDCLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLEQDHGFTPVIATAFNQHKFFT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCHHHHHHHCCCEEEC
GEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKT
CCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCC
DLKNLKQVEAASPAVPLTGDCLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLEQDHGFTPVIATAFNQHKFFT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCHHHHHHHCCCEEEC
GEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA